RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TADA3O75528 432 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 SLC6A3Q01959 620 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 C4orf50Q6ZRC1 276 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 DCP1BQ8IZD4 617 aaKnown RBP19.53■□□□□ 0.72
PRKCA-203ENST00000578063 JOSD2Q8TAC2 188 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 GPR62Q9BZJ7 368 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 UBXN6Q9BZV1 441 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.53■□□□□ 0.72
PRKCA-203ENST00000578063 PCDHA3Q9Y5H8 950 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 OR6C75A6NL08 312 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 PIK3R2O00459 728 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 PSTPIP1O43586 416 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 TUBB4BP68371 445 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 ZNF252P-AS1Q0IIN9 211 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 C7orf61Q8IZ16 206 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 LRRN4CLQ8ND94 238 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 KRT35Q92764 455 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 OXCT2Q9BYC2 517 aaPredicted RBP19.52■□□□□ 0.72
PRKCA-203ENST00000578063 ZCWPW1Q9H0M4 648 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 CSNK1G1Q9HCP0 422 aa19.52■□□□□ 0.72
PRKCA-203ENST00000578063 NT5C1B-RDH14C9J2C7 533 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 GABBR2O75899 941 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 PSMA2P25787 234 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 PBX3P40426 434 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 MAP3K7CLP57077 242 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 OGDHQ02218 1023 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 ITIH3Q06033 890 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 MRPL58Q14197 206 aaKnown RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 NFE2Q16621 373 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 OTOP2Q7RTS6 562 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 TMEM173Q86WV6 379 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 CPNE8Q86YQ8 564 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 SPATA2LQ8IUW3 424 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 RHOT1Q8IXI2 618 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 RASGEF1CQ8N431 466 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 ACTRT1Q8TDG2 376 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 ALG3Q92685 438 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 GOLGA1Q92805 767 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 BADQ92934 168 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 TMEM209Q96SK2 561 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 SMOQ99835 787 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 LRRC4Q9HBW1 653 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 TMEM59LQ9UK28 342 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 H7C4K7 107 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 PDE2AO00408 941 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 CEP104O60308 925 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 BEST1O76090 585 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 FGBP02675 491 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 LCP1P13796 627 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 PEX5P50542 639 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 RWDD2BP57060 319 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 BTG3Q14201 252 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 ACAP1Q15027 740 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 CLUL1Q15846 466 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 CTXN3Q4LDR2 81 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 SLC26A9Q7LBE3 791 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 ARCQ7LC44 396 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 LRRTM3Q86VH5 581 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 CEP57Q86XR8 500 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 SCUBE3Q8IX30 993 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 DMAP1Q9NPF5 467 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 TMLHEQ9NVH6 421 aa19.51■□□□□ 0.71
PRKCA-203ENST00000578063 TTC7AQ9ULT0 858 aaPredicted RBP19.51■□□□□ 0.71
PRKCA-203ENST00000578063 C2CD4BA6NLJ0 364 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 PGRMC1O00264 195 aaKnown RBP19.5■□□□□ 0.71
PRKCA-203ENST00000578063 LAG3P18627 525 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 GPD1P21695 349 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 MARCKSL1P49006 195 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 ZNF143P52747 638 aaPredicted RBP19.5■□□□□ 0.71
PRKCA-203ENST00000578063 ADIGQ0VDE8 80 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 SPOUT1Q5T280 376 aaKnown RBP19.5■□□□□ 0.71
PRKCA-203ENST00000578063 DCAF12L1Q5VU92 463 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 FAM117BQ6P1L5 589 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 ANKS3Q6ZW76 656 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 C16orf59Q7L2K0 433 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 SIX6OS1Q8N1H7 587 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 EMC1Q8N766 993 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 BCL7CQ8WUZ0 217 aaPredicted RBP19.5■□□□□ 0.71
PRKCA-203ENST00000578063 FUBP3Q96I24 572 aaKnown RBP eCLIP19.5■□□□□ 0.71
PRKCA-203ENST00000578063 IGSF21Q96ID5 467 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 PIWIL1Q96J94 861 aaKnown RBP19.5■□□□□ 0.71
PRKCA-203ENST00000578063 MS4A14Q96JA4 679 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 ZNF558Q96NG5 402 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 TTPALQ9BTX7 342 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 PLVAPQ9BX97 442 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 PNPLA8Q9NP80 782 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 PCDH10Q9P2E7 1040 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 USTQ9Y2C2 406 aa19.5■□□□□ 0.71
PRKCA-203ENST00000578063 ZBBXA8MT70 800 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 FBXO21O94952 628 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 EFEMP2O95967 443 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 DESP17661 470 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 BDNFP23560 247 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 SLC39A12Q504Y0 691 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 SEL1L2Q5TEA6 688 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 LRRC38Q5VT99 294 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 CC2D1AQ6P1N0 951 aaPredicted RBP19.49■□□□□ 0.71
PRKCA-203ENST00000578063 KCNT2Q6UVM3 1135 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 ZNF365Q70YC5 407 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms