RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CDK5RAP3Q96JB5 506 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 ZC3H10Q96K80 434 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 P2RY13Q9BPV8 354 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 PYM1Q9BRP8 204 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 EDEM2Q9BV94 578 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 ABI2Q9NYB9 513 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 DSEQ9UL01 958 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 DNAH14Q0VDD8 3507 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 CACNA1AO00555 2505 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 PATJQ8NI35 1801 aa7.41□□□□□ -1.22
SMARCE1-212ENST00000577721 NPHP3-ACAD11A0A0J9YXS1 232 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 OTOL1A6NHN0 477 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 GIPC1O14908 333 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 OGTO15294 1046 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 APBB3O95704 486 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 C1QTNF9P0C862 333 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 PLA2G4BP0C869 781 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 HAPLN1P10915 354 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 SPINK2P20155 84 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 DDX6P26196 483 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 NMT1P30419 496 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 ZNF252P-AS1Q0IIN9 211 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 NR1H3Q13133 447 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 DHX8Q14562 1220 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 DMC1Q14565 340 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TMEM132DQ14C87 1099 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 KARSQ15046 597 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 PDGFRLQ15198 375 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 ENOX2Q16206 610 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 UAP1L1Q3KQV9 507 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 FBXO43Q4G163 708 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 USP39Q53GS9 565 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 SH3PXD2AQ5TCZ1 1133 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 SPATA1Q5VX52 437 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TXNDC8Q6A555 127 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 JADE1Q6IE81 842 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 UNQ6494/PRO21346Q6UXR6 183 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 KCNK18Q7Z418 384 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TTC30AQ86WT1 665 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 CD302Q8IX05 232 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 DCP1BQ8IZD4 617 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 CPA6Q8N4T0 437 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 MYCT1Q8N699 235 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 SYT2Q8N9I0 419 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 OR10T2Q8NGX3 314 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 RPLP0P6Q8NHW5 317 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 USP13Q92995 863 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 CHFRQ96EP1 664 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TRIM11Q96F44 468 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TSPAN18Q96SJ8 248 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 FAM83CQ9BQN1 747 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 MSTO1Q9BUK6 570 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 HAPLN2Q9GZV7 340 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 ZCWPW1Q9H0M4 648 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 DUSP15Q9H1R2 295 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 ZHX3Q9H4I2 956 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 FBRSL1Q9HCM7 1045 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TRPC7Q9HCX4 862 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 HPS4Q9NQG7 708 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 TDP1Q9NUW8 608 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 DUS2Q9NX74 493 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 LARSQ9P2J5 1176 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 HSFX1Q9UBD0 423 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 LIMCH1Q9UPQ0 1083 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 CCL26Q9Y258 94 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 PCDHB6Q9Y5E3 794 aa7.4□□□□□ -1.22
SMARCE1-212ENST00000577721 ARID2Q68CP9 1835 aa7.4□□□□□ -1.23
SMARCE1-212ENST00000577721 NOTCH4Q99466 2003 aa7.4□□□□□ -1.23
SMARCE1-212ENST00000577721 NCOR2Q9Y618 2525 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 BCLAF3A2AJT9 711 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 LAD1O00515 517 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 HNRNPDLO14979 420 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 FAM13AO94988 1023 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 KRT18P05783 430 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 NFICP08651 508 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 ATF6P18850 670 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 IFNAR2P48551 515 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 TAF6P49848 677 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 TOB1P50616 345 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 NLRP12P59046 1061 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 HMGN5P82970 282 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 TSPY1Q01534 308 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 UBAP2LQ14157 1087 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 IL17AQ16552 155 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 SDHAF4Q5VUM1 108 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 WSCD1Q658N2 575 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 SYT13Q7L8C5 426 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 LRRTM3Q86VH5 581 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 MON1AQ86VX9 555 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 PARP9Q8IXQ6 854 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 TSTD1Q8NFU3 115 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 SPPL2BQ8TCT7 592 aa7.39□□□□□ -1.23
SMARCE1-212ENST00000577721 C2orf15Q8WU43 125 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms