RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SNX22Q96L94 193 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 UROC1Q96N76 676 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 NAA15Q9BXJ9 866 aaKnown RBP6.43□□□□□ -1.38
NUP88-213ENST00000576862 GLOD4Q9HC38 313 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 ARHGEF3Q9NR81 526 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 ASB6Q9NWX5 421 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 SNX13Q9Y5W8 968 aa6.43□□□□□ -1.38
NUP88-213ENST00000576862 SUV39H1O43463 412 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 PRC1O43663 620 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 VNN1O95497 513 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 TTLL1O95922 423 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 MT-ND5P03915 603 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 PHKG2P15735 406 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 ACVR2AP27037 513 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 CASP5P51878 434 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 ZNF543Q08ER8 600 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 DAG1Q14118 895 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 ARHGEF7Q14155 803 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 INSCQ1MX18 579 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 PLAC9Q5JTB6 97 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 TSTD2Q5T7W7 516 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 STRIP1Q5VSL9 837 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 KSR2Q6VAB6 950 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 CCAR1Q8IX12 1150 aaKnown RBP6.42□□□□□ -1.38
NUP88-213ENST00000576862 DNAJB14Q8TBM8 379 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 SOCS4Q8WXH5 440 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 R3HDM4Q96D70 268 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 BRIP1Q9BX63 1249 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 TRIM5Q9C035 493 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 DHX36Q9H2U1 1008 aaKnown RBP6.42□□□□□ -1.38
NUP88-213ENST00000576862 DLL3Q9NYJ7 618 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 ADAM21Q9UKJ8 722 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 HDAC9Q9UKV0 1011 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 SH2B3Q9UQQ2 575 aa6.42□□□□□ -1.38
NUP88-213ENST00000576862 COL11A2P13942 1736 aaPredicted RBP6.42□□□□□ -1.38
NUP88-213ENST00000576862 RAB27BO00194 218 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 KPNA5O15131 536 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 RRP9O43818 475 aaKnown RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 CAND2O75155 1236 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 IL18RAPO95256 599 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 ONECUT2O95948 504 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 IGLV2-14P01704 120 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 EBLN1P0CF75 366 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 WT1P19544 449 aaPredicted RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 BTF3P20290 206 aaKnown RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 DRD4P21917 467 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 PTDSS1P48651 473 aaKnown RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 ALDH9A1P49189 494 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 CARSP49589 748 aaKnown RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 NANOS3P60323 173 aaKnown RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 SLC9A4Q6AI14 798 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 FBXO42Q6P3S6 717 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 ARHGEF25Q86VW2 580 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 RASAL3Q86YV0 1011 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 IZUMO1Q8IYV9 350 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 RNF152Q8N8N0 203 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
NUP88-213ENST00000576862 HAPLN3Q96S86 360 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 C17orf80Q9BSJ5 609 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 ARNT2Q9HBZ2 717 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 ITGB1BP2Q9UKP3 347 aa6.41□□□□□ -1.38
NUP88-213ENST00000576862 H0YIZ8 118 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 GCOM1H8Y6P7 765 aaPredicted RBP6.4□□□□□ -1.38
NUP88-213ENST00000576862 FOXN3O00409 490 aaPredicted RBP6.4□□□□□ -1.38
NUP88-213ENST00000576862 SRGAP2O75044 1071 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 PRIM2P49643 509 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 CPT1AP50416 773 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 CCT8P50990 548 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 CCNIQ14094 377 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 SLC29A2Q14542 456 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 CACHD1Q5VU97 1274 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 ADGRG3Q86Y34 549 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 YAF2Q8IY57 180 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 SPARTQ8N0X7 666 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 BOLLQ8N9W6 283 aaKnown RBP6.4□□□□□ -1.38
NUP88-213ENST00000576862 CCDC136Q96JN2 1154 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 TBCBQ99426 244 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 AS3MTQ9HBK9 375 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 CPNE5Q9HCH3 593 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 PNPLA8Q9NP80 782 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 TRMT13Q9NUP7 481 aaKnown RBP6.4□□□□□ -1.38
NUP88-213ENST00000576862 ARPP21Q9UBL0 812 aaPredicted RBP6.4□□□□□ -1.38
NUP88-213ENST00000576862 DKK4Q9UBT3 224 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 GABRQQ9UN88 632 aa6.4□□□□□ -1.38
NUP88-213ENST00000576862 ANO9A1A5B4 782 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 LRRC3CA6NJW4 275 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 CD3EAPO15446 510 aaKnown RBP6.39□□□□□ -1.39
NUP88-213ENST00000576862 RASAL1O95294 804 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 ANXA2P07355 339 aaKnown RBP6.39□□□□□ -1.39
NUP88-213ENST00000576862 TSHRP16473 764 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 IL1R2P27930 398 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 ITGA8P53708 1063 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 BCAT1P54687 386 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 AKNAD1Q5T1N1 836 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 CERCAMQ5T4B2 595 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 CCDC181Q5TID7 509 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 KLHDC7AQ5VTJ3 777 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
NUP88-213ENST00000576862 ANKRD16Q6P6B7 361 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms