RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 DENND5BQ6ZUT9 1274 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 DPH6Q7L8W6 267 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 DYMQ7RTS9 669 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 OSTM1Q86WC4 334 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 CCDC33Q8N5R6 958 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 DEFB124Q8NES8 71 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 MAGEC2Q9UBF1 373 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 STK17AQ9UEE5 414 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 PTPRDP23468 1912 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 LEFTY2O00292 366 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 GCNT3O95395 438 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 CYP17A1P05093 508 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 GRIK1P39086 918 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 EIF2DP41214 584 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 P2RY2P41231 377 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 PPP3CCP48454 512 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 WNT7BP56706 349 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 ALCAMQ13740 583 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 CCDC142Q17RM4 750 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 SOWAHAQ2M3V2 549 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 SPDYCQ5MJ68 293 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 EOGTQ5NDL2 527 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 FAM171BQ6P995 826 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 BRAPQ7Z569 592 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 SYT12Q8IV01 421 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 SYCP3Q8IZU3 236 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 OLIG1Q8TAK6 271 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 NOC3LQ8WTT2 800 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 GATA6Q92908 595 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 PNKPQ96T60 521 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 SYT15Q9BQS2 421 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 MTMR12Q9C0I1 747 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 CDH9Q9ULB4 789 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 TNRC6BQ9UPQ9 1833 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 PLXND1Q9Y4D7 1925 aa12.45□□□□□ -0.42
CTDNEP1-212ENST00000576613 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 TRIM66O15016 1216 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 KLF8O95600 359 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 ADH1CP00326 375 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 APODP05090 189 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 BDNFP23560 247 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 RDXP35241 583 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 HOXD12P35452 270 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 TXLNAP40222 546 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 MAPK8P45983 427 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 PSMC1P62191 440 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 SLC7A9P82251 487 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 GRIN1Q05586 938 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 KCNA1Q09470 495 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 RESTQ13127 1097 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 COL9A2Q14055 689 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 RABEP1Q15276 862 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 GAB4Q2WGN9 574 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 ARMCX6Q7L4S7 300 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 DDX42Q86XP3 938 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 ADGRG2Q8IZP9 1017 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 ALLCQ8N6M5 410 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 TXNDC5Q8NBS9 432 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 MYLPFQ96A32 169 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 PDE11AQ9HCR9 933 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 OLFML3Q9NRN5 406 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 TBC1D7Q9P0N9 293 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 NEUROG3Q9Y4Z2 214 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZFYVE26Q68DK2 2539 aa12.44□□□□□ -0.42
CTDNEP1-212ENST00000576613 PKD1L2Q7Z442 2459 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 SRRM3A6NNA2 597 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 KIAA0391O15091 583 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 HCRTO43612 131 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ATP2C2O75185 946 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 KAT7O95251 611 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 TOP3BO95985 862 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ABL1P00519 1130 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 TNNC2P02585 160 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ENGP17813 658 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 TIE1P35590 1138 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 GRIA2P42262 883 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ATXN3P54252 364 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 USP46P62068 366 aa12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 NOP14P78316 857 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZXDBP98169 803 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms