RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ANTXRLA6NF34 631 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 NCAM2O15394 837 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 BEST1O76090 585 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 ABL1P00519 1130 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 CKMP06732 381 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 TDGF1P13385 188 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 CCDC130P13994 396 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 VAMP7P51809 220 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 TAF10Q12962 218 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 RUNX3Q13761 415 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 KCNB1Q14721 858 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
LITAF-219ENST00000576334 ZNF77Q15935 545 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 ITPRIPL2Q3MIP1 535 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 GUF1Q8N442 669 aaKnown RBP12.66□□□□□ -0.38
LITAF-219ENST00000576334 C12orf29Q8N999 325 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 SUMF1Q8NBK3 374 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 ENGASEQ8NFI3 743 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 SCAMP5Q8TAC9 235 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 TMEM174Q8WUU8 243 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 SPATA17Q96L03 361 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 TWNKQ96RR1 684 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 LINC00597Q9H2U6 94 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 C8orf33Q9H7E9 229 aaPredicted RBP12.66□□□□□ -0.38
LITAF-219ENST00000576334 VRTNQ9H8Y1 702 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 PRMT8Q9NR22 394 aaPredicted RBP12.66□□□□□ -0.38
LITAF-219ENST00000576334 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
LITAF-219ENST00000576334 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 SPTBN4Q9H254 2564 aa12.66□□□□□ -0.38
LITAF-219ENST00000576334 MYH10P35580 1976 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 GVINP1Q7Z2Y8 2422 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 TRAV19A0A0A6YYK7 116 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 ASS1P00966 412 aaKnown RBP12.65□□□□□ -0.38
LITAF-219ENST00000576334 LMNAP02545 664 aaKnown RBP12.65□□□□□ -0.38
LITAF-219ENST00000576334 HDCP19113 662 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.38
LITAF-219ENST00000576334 ANXA13P27216 316 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 PIK3CAP42336 1068 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 PRCPP42785 496 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 ASPAP45381 313 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 PGFP49763 221 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 NDST1P52848 882 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
LITAF-219ENST00000576334 ADAM9Q13443 819 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 CCINQ13939 588 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 BECN1Q14457 450 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 MTF1Q14872 753 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 FSTL4Q6MZW2 842 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 FAM35AQ86V20 835 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 RALGPS2Q86X27 583 aaPredicted RBP12.65□□□□□ -0.38
LITAF-219ENST00000576334 FAM186BQ8IYM0 893 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 FUKQ8N0W3 1084 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 SH3RF2Q8TEC5 729 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 SEMA4DQ92854 862 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 C8orf48Q96LL4 319 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 MED10Q9BTT4 135 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 FAM49BQ9NUQ9 324 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 THG1LQ9NWX6 298 aaKnown RBP12.65□□□□□ -0.38
LITAF-219ENST00000576334 SMPD4Q9NXE4 827 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.38
LITAF-219ENST00000576334 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 TRIM66O15016 1216 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 EGFP01133 1207 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 USP17L7P0C7H9 530 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 MAGEA9P43362 315 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 AP3M2P53677 418 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
LITAF-219ENST00000576334 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 FAM160A1Q05DH4 1040 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 USP4Q13107 963 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
LITAF-219ENST00000576334 LPAL2Q16609 132 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 NFIL3Q16649 462 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 SGSM1Q2NKQ1 1148 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 ZNF528Q3MIS6 628 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 ZBTB44Q8NCP5 570 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 SLC2A14Q8TDB8 520 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 EZH1Q92800 747 aaPredicted RBP12.64□□□□□ -0.39
LITAF-219ENST00000576334 NELL1Q92832 810 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
LITAF-219ENST00000576334 SMOQ99835 787 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 DUS2Q9NX74 493 aaKnown RBP12.64□□□□□ -0.39
LITAF-219ENST00000576334 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
LITAF-219ENST00000576334 PCDHA5Q9Y5H7 936 aa12.64□□□□□ -0.39
LITAF-219ENST00000576334 OTOGLQ3ZCN5 2332 aa12.63□□□□□ -0.39
LITAF-219ENST00000576334 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
LITAF-219ENST00000576334 LEFTY2O00292 366 aa12.63□□□□□ -0.39
LITAF-219ENST00000576334 TNFRSF10BO14763 440 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms