RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SCAMP5Q8TAC9 235 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 UBA3Q8TBC4 463 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 KIAA1524Q8TCG1 905 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 SPPL2BQ8TCT7 592 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 HDAC7Q8WUI4 952 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 NDRG1Q92597 394 aaKnown RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 FGF13Q92913 245 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 PSMG2Q969U7 264 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 RSPRY1Q96DX4 576 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 MCRS1Q96EZ8 462 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 TMEM176AQ96HP8 235 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 RIPOR3Q96MK2 946 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 SLC22A12Q96S37 553 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 PHF7Q9BWX1 381 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 NT5C1AQ9BXI3 368 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 CYP3A43Q9HB55 503 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 PLCB1Q9NQ66 1216 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 FAM207AQ9NSI2 230 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 SPTLC3Q9NUV7 552 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 APEX2Q9UBZ4 518 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 TJP2Q9UDY2 1190 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 MUTYHQ9UIF7 546 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 NCOR1O75376 2440 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 MYO10Q9HD67 2058 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 WDFY4Q6ZS81 3184 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 C19orf67A6NJJ6 358 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 LOC730098B7Z3J9 87 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 SCAMP3O14828 347 aaKnown RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 PMM2O15305 246 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 P4HA2O15460 535 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CYP26A1O43174 497 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 XYLBO75191 536 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 GABBR2O75899 941 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 MICAL2O94851 1124 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 PRAMEF12O95522 483 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 KRT5P13647 590 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CD19P15391 556 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 FCARP24071 287 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 MTHFRP42898 656 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 ALDH1A3P47895 512 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 RGS7P49802 495 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 SLC5A3P53794 718 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 EPHB3P54753 998 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 UBASH3AP57075 661 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 GSDMDP57764 484 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CCZ1BP86790 482 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CCZ1P86791 482 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 RAPGEF1Q13905 1077 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 ATAT1Q5SQI0 421 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 E4F1Q66K89 784 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 DENND1BQ6P3S1 775 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 PARM1Q6UWI2 310 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 C4orf50Q6ZRC1 276 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 PDZD4Q76G19 769 aaPredicted RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 PASD1Q8IV76 773 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 LRRC8AQ8IWT6 810 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 ADHFE1Q8IWW8 467 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CRYBG2Q8N1P7 616 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 TDRD5Q8NAT2 981 aaKnown RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 SPATA18Q8TC71 538 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 FGF14Q92915 247 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CYFIP2Q96F07 1278 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 HEXIM2Q96MH2 286 aaKnown RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 KXD1Q9BQD3 176 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 PLA2G2FQ9BZM2 168 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 NLRC4Q9NPP4 1024 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 ASAH2Q9NR71 780 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 KCND1Q9NSA2 647 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 CYTH4Q9UIA0 394 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 DNAJC12Q9UKB3 198 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 TSPAN16Q9UKR8 245 aa8.38□□□□□ -1.07
CCDC40-215ENST00000576033 MRPS23Q9Y3D9 190 aaKnown RBP8.38□□□□□ -1.07
CCDC40-215ENST00000576033 ITIH6Q6UXX5 1313 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 C2orf78A6NCI8 922 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 O00370 1275 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 SERPINC1P01008 464 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 FAM200BP0CF97 657 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 PTPN2P17706 415 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 CDK11BP21127 795 aaKnown RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 TBXAS1P24557 533 aaPredicted RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 USP8P40818 1118 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 VIPR2P41587 438 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 EPHA5P54756 1037 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 POLR2FP61218 127 aaKnown RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 GCNT1Q02742 428 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 UBXN1Q04323 297 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 PDE4CQ08493 712 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 GRM2Q14416 872 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 KLHDC7AQ5VTJ3 777 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 TXNDC8Q6A555 127 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 UNC93AQ86WB7 457 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 RNF135Q8IUD6 432 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 TTC16Q8NEE8 873 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 CLEC4CQ8WTT0 213 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 SLC20A1Q8WUM9 679 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms