RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ATXN10Q9UBB4 475 aa15.18■□□□□ 0.02
SCARF1-209ENST00000576012 ITGB5P18084 799 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 ATP2B4P23634 1241 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 YWHABP31946 246 aaKnown RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 RPL22P35268 128 aaKnown RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 GALK1P51570 392 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 VCPP55072 806 aaKnown RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 OGDHQ02218 1023 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 ORC1Q13415 861 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 RNF111Q6ZNA4 994 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 EMC1Q8N766 993 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 HSPH1Q92598 858 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 KCNH7Q9NS40 1196 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 PCDHB2Q9Y5E7 798 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 TCRBV9S1A1TA0A576 114 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 HNRNPCL1O60812 293 aaKnown RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 TPP2P29144 1249 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 LMNB2Q03252 620 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 MAP7Q14244 749 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 HIC1Q14526 733 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 VWA5B1Q5TIE3 1220 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 APOBEC3HQ6NTF7 200 aaKnown RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 NPNTQ6UXI9 565 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 SCARA5Q6ZMJ2 495 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 TDRPQ86YL5 185 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 HPS6Q86YV9 775 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 KATNAL2Q8IYT4 538 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 FEZF2Q8TBJ5 459 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 PPP2R3CQ969Q6 453 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 TEKT1Q969V4 418 aa15.17■□□□□ 0.02
SCARF1-209ENST00000576012 PIH1D1Q9NWS0 290 aaKnown RBP15.17■□□□□ 0.02
SCARF1-209ENST00000576012 PLSCR1O15162 318 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 WEE2P0C1S8 567 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 ACTR3P61158 418 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TAF5Q15542 800 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 ADGRD1Q6QNK2 874 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 MON1BQ7L1V2 547 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 ZNF516Q92618 1163 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 CNBD2Q96M20 576 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TUBB6Q9BUF5 446 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 KMT5AQ9NQR1 393 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TBX20Q9UMR3 447 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TDRKHQ9Y2W6 561 aaKnown RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 ARFGEF1Q9Y6D6 1849 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 ATP6V1G1O75348 118 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TM7SF2O76062 418 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 F7P08709 466 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 VCLP18206 1134 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 SPP2Q13103 211 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TCEAL1Q15170 157 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 NFIL3Q16649 462 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 EML3Q32P44 896 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 APLFQ8IW19 511 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 GALNT4Q8N4A0 578 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 E2F7Q96AV8 911 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 NR1H4Q96RI1 486 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 KLHL4Q9C0H6 718 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TJP2Q9UDY2 1190 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 MAD1L1Q9Y6D9 718 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 P4HA2O15460 535 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 PSTPIP1O43586 416 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 HLA-DRAP01903 254 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 RAG1P15918 1043 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 EIF2AK2P19525 551 aaKnown RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 NPTX2P47972 431 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 PDK3Q15120 406 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 MMADHCQ9H3L0 296 aaPredicted RBP15.16■□□□□ 0.02
SCARF1-209ENST00000576012 ACSS3Q9H6R3 686 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 TAGLN3Q9UI15 199 aa15.16■□□□□ 0.02
SCARF1-209ENST00000576012 A8MXQ7 604 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 PEX1O43933 1283 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 HNRNPCP07910 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCARF1-209ENST00000576012 STAT2P52630 851 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 LSAMPQ13449 338 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 DNAJC24Q6P3W2 148 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 RFX6Q8HWS3 928 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 BSNDQ8WZ55 320 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
SCARF1-209ENST00000576012 ZNF711Q9Y462 761 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 IQANK1A0A1B0GTG1 560 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 TM9SF1O15321 606 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 DNAJC6O75061 913 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 GPC3P51654 580 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 KLHL38Q2WGJ6 581 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 TRMT5Q32P41 509 aaKnown RBP15.15■□□□□ 0.02
SCARF1-209ENST00000576012 SH3BP5LQ7L8J4 393 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 DHDDSQ86SQ9 333 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 RCOR2Q8IZ40 523 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 ZBTB45Q96K62 511 aaPredicted RBP15.15■□□□□ 0.02
SCARF1-209ENST00000576012 LIN28AQ9H9Z2 209 aaKnown RBP15.15■□□□□ 0.02
SCARF1-209ENST00000576012 IFT122Q9HBG6 1241 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 MAN1C1Q9NR34 630 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 SLC17A6Q9P2U8 582 aa15.15■□□□□ 0.02
SCARF1-209ENST00000576012 RPL26L1Q9UNX3 145 aaKnown RBP15.15■□□□□ 0.02
SCARF1-209ENST00000576012 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms