RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 USP13Q92995 863 aaPredicted RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 KREMEN1Q96MU8 473 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 TSG101Q99816 390 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 NUP62CLQ9H1M0 184 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 TASP1Q9H6P5 420 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 CYP3A43Q9HB55 503 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 TRPV5Q9NQA5 729 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 ARHGEF3Q9NR81 526 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 CISHQ9NSE2 258 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 FAM49BQ9NUQ9 324 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 LAMA1P25391 3075 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 GVINP1Q7Z2Y8 2422 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 HEPACAM2A8MVW5 462 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 GABBR2O75899 941 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 TCF3P15923 654 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 AOC1P19801 751 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 CDC25CP30307 473 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 SLC5A3P53794 718 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 STARD6P59095 220 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 RPL10AP62906 217 aaKnown RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 APBA1Q02410 837 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 CUL2Q13617 745 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 ZNF268Q14587 947 aaPredicted RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 MAPRE1Q15691 268 aaKnown RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 GAB4Q2WGN9 574 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 PKDCCQ504Y2 493 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 GPR158Q5T848 1215 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 CYP4A22Q5TCH4 519 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 SNX30Q5VWJ9 437 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 DENND5BQ6ZUT9 1274 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 MON1AQ86VX9 555 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 TTC30AQ86WT1 665 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 MFSD6LQ8IWD5 586 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 CMTM8Q8IZV2 173 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 SCAMP5Q8TAC9 235 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 DNASE1L2Q92874 299 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 SMARCD1Q96GM5 515 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 CNOT6LQ96LI5 555 aaKnown RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 HNRNPABQ99729 332 aaKnown RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 FOXQ1Q9C009 403 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 ATXN3LQ9H3M9 355 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 FAM124BQ9H5Z6 455 aaPredicted RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 SIX2Q9NPC8 291 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 HPS4Q9NQG7 708 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 OSER1Q9NX31 292 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 OBP2AQ9NY56 170 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 TMEM63CQ9P1W3 806 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 MAGEC2Q9UBF1 373 aaPredicted RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 CA14Q9ULX7 337 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 CNTN6Q9UQ52 1028 aa9.22□□□□□ -0.93
SMG6-216ENST00000575176 MTF2Q9Y483 593 aaPredicted RBP9.22□□□□□ -0.93
SMG6-216ENST00000575176 PLXND1Q9Y4D7 1925 aa9.21□□□□□ -0.93
SMG6-216ENST00000575176 OTOGLQ3ZCN5 2332 aa9.21□□□□□ -0.93
SMG6-216ENST00000575176 BICDL2A1A5D9 508 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 ZNF840PA6NDX5 716 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 SOBPA7XYQ1 873 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 RNF225M0QZC1 329 aaPredicted RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 TULP2O00295 520 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 TRIM66O15016 1216 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 GREM1O60565 184 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 FGF19O95750 216 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 CALCAP01258 141 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 PSMC3P17980 439 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 CD58P19256 250 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 STIM1Q13586 685 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 VEPH1Q14D04 833 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 CDKAL1Q5VV42 579 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 ARHGAP17Q68EM7 881 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 PHLDB3Q6NSJ2 640 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 C11orf57Q6ZUT1 292 aaPredicted RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 APTXQ7Z2E3 356 aaKnown RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 GPIHBP1Q8IV16 184 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 SCN4BQ8IWT1 228 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 MLKLQ8NB16 471 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 DEPDC1BQ8WUY9 529 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 TFAP2BQ92481 460 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 PBXIP1Q96AQ6 731 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 P2RY11Q96G91 374 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 ZFYVE19Q96K21 471 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 FAM83CQ9BQN1 747 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 GPR88Q9GZN0 384 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 TBC1D17Q9HA65 648 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 METTL14Q9HCE5 456 aaKnown RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 ZFP14Q9HCL3 533 aa9.21□□□□□ -0.94
SMG6-216ENST00000575176 DMAP1Q9NPF5 467 aaPredicted RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
SMG6-216ENST00000575176 TNRC6BQ9UPQ9 1833 aaKnown RBP9.2□□□□□ -0.94
SMG6-216ENST00000575176 BECN2A8MW95 431 aa9.2□□□□□ -0.94
SMG6-216ENST00000575176 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
SMG6-216ENST00000575176 O00370 1275 aa9.2□□□□□ -0.94
SMG6-216ENST00000575176 P4HA2O15460 535 aa9.2□□□□□ -0.94
SMG6-216ENST00000575176 AP1G2O75843 785 aa9.2□□□□□ -0.94
SMG6-216ENST00000575176 DDX6P26196 483 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMG6-216ENST00000575176 TARSP26639 723 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms