RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SMYD5Q6GMV2 418 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 ALKAL1Q6UXT8 129 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 BBOF1Q8ND07 529 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 CALN1Q9BXU9 219 aa24.83■■□□□ 1.57
NPLOC4-217ENST00000574897 C2CD4BA6NLJ0 364 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 FAM107AO95990 144 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 PDGFRAP16234 1089 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 GPD1P21695 349 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 CDR1P51861 262 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 ZNF143P52747 638 aaPredicted RBP24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 NRLP54845 237 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 SOWAHAQ2M3V2 549 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 C9orf57Q5W0N0 161 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 EXOC3L1Q86VI1 746 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 OR6B3Q8NGW1 331 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 CFAP57Q96MR6 1250 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 B3GNT5Q9BYG0 378 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 GMNCA6NCL1 334 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 ITGAVP06756 1048 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 ATP11AP98196 1134 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 GAD2Q05329 585 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 TAZQ16635 292 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 PKDCCQ504Y2 493 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 ZNF618Q5T7W0 954 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 BBS12Q6ZW61 710 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 RFX6Q8HWS3 928 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 ZCCHC9Q8N567 271 aaKnown RBP24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 BEST2Q8NFU1 509 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 TRPM7Q96QT4 1865 aa24.82■■□□□ 1.56
NPLOC4-217ENST00000574897 SPTLC1O15269 473 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 MFSD5Q6N075 450 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 RASAL3Q86YV0 1011 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 SCUBE3Q8IX30 993 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 CMASQ8NFW8 434 aaPredicted RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 CNOT10Q9H9A5 744 aaKnown RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 SAYSD1Q9NPB0 183 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 CNTN3Q9P232 1028 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 DERAQ9Y315 318 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 HAS3O00219 553 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 PDGFRBP09619 1106 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 FGFR1P11362 822 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 MAGEA4P43358 317 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 ZNF157P51786 506 aaPredicted RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 SOX4Q06945 474 aaPredicted RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 NPNTQ6UXI9 565 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 XPO6Q96QU8 1125 aaKnown RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 ROPN1BQ9BZX4 212 aaPredicted RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 TSPYL1Q9H0U9 437 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 ROPN1Q9HAT0 212 aaPredicted RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 ASNSD1Q9NWL6 643 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 TPX2Q9ULW0 747 aaKnown RBP24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 FAM169AQ9Y6X4 670 aa24.81■■□□□ 1.56
NPLOC4-217ENST00000574897 GOLGA8MH3BSY2 632 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 BANF1O75531 89 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 UBXN11Q5T124 520 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 CYP4X1Q8N118 509 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 C7orf31Q8N865 590 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 CNPY3Q9BT09 278 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 GPATCH2LQ9NWQ4 482 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 TBK1Q9UHD2 729 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 KIAA1257Q9ULG3 409 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 SMIM28A0A1B0GU29 152 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 LMO2P25791 158 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 ERMARDQ5T6L9 678 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 OLFML1Q6UWY5 402 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 ATXN2LQ8WWM7 1075 aaKnown RBP24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 KHSRPQ92945 711 aaKnown RBP eCLIP24.8■■□□□ 1.562e-6■■■□□ 14.8
NPLOC4-217ENST00000574897 MIS12Q9H081 205 aa24.8■■□□□ 1.56
NPLOC4-217ENST00000574897 CCDC130P13994 396 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 CCDC14Q49A88 953 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 RNASEH2BQ5TBB1 312 aaKnown RBP24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 CAPN12Q6ZSI9 719 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 UNC45BQ8IWX7 931 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 ARRDC4Q8NCT1 418 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 CLEC4CQ8WTT0 213 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 USP6NLQ92738 828 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 PCDH9Q9HC56 1237 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 A8MXQ7 604 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 CDH6P55285 790 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 CROCCP2Q86T23 111 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 C10orf67Q8IYJ2 551 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 LRRC52Q8N7C0 313 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 KBTBD7Q8WVZ9 684 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 ARHGEF2Q92974 986 aaKnown RBP24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 NMRK2Q9NPI5 230 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 EFR3BQ9Y2G0 817 aa24.79■■□□□ 1.56
NPLOC4-217ENST00000574897 MYADML2A6NDP7 307 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 PAPSS1O43252 624 aaPredicted RBP24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 TFE3P19532 575 aaPredicted RBP24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 ADORA2BP29275 332 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 MTM1Q13496 603 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 ANKRD22Q5VYY1 191 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 APBB1IPQ7Z5R6 666 aaPredicted RBP24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 TTC39CQ8N584 583 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 SLC35F5Q8WV83 523 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 PKNOX2Q96KN3 472 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 SERPINB12Q96P63 405 aa24.78■■□□□ 1.56
NPLOC4-217ENST00000574897 NGRNQ9NPE2 291 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms