RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ADGRG6Q86SQ4 1221 aa15.05■□□□□ -0
SMG6-215ENST00000574501 MAP7D3Q8IWC1 876 aa15.05■□□□□ -0
SMG6-215ENST00000574501 TRIM42Q8IWZ5 723 aa15.05■□□□□ -0
SMG6-215ENST00000574501 SLF2Q8IX21 1173 aa15.05■□□□□ -0
SMG6-215ENST00000574501 WWP1Q9H0M0 922 aa15.05■□□□□ -0
SMG6-215ENST00000574501 CYP4F11Q9HBI6 524 aa15.05■□□□□ -0
SMG6-215ENST00000574501 PCDH9Q9HC56 1237 aa15.05■□□□□ -0
SMG6-215ENST00000574501 KCND2Q9NZV8 630 aa15.05■□□□□ -0
SMG6-215ENST00000574501 FETUBQ9UGM5 382 aa15.05■□□□□ -0
SMG6-215ENST00000574501 CIDEBQ9UHD4 219 aa15.05■□□□□ -0
SMG6-215ENST00000574501 SMCHD1A6NHR9 2005 aa15.05■□□□□ -0
SMG6-215ENST00000574501 MYOCOSA0A1B0GUC4 107 aa15.04■□□□□ -0
SMG6-215ENST00000574501 COPEO14579 308 aa15.04■□□□□ -0
SMG6-215ENST00000574501 ARP10275 920 aa15.04■□□□□ -0
SMG6-215ENST00000574501 PCSK6P29122 969 aa15.04■□□□□ -0
SMG6-215ENST00000574501 GTF2H1P32780 548 aa15.04■□□□□ -0
SMG6-215ENST00000574501 SLC18A2Q05940 514 aa15.04■□□□□ -0
SMG6-215ENST00000574501 ITGA9Q13797 1035 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TLR1Q15399 786 aa15.04■□□□□ -0
SMG6-215ENST00000574501 LIN9Q5TKA1 542 aa15.04■□□□□ -0
SMG6-215ENST00000574501 CIAPIN1Q6FI81 312 aa15.04■□□□□ -0
SMG6-215ENST00000574501 DRICH1Q6PGQ1 229 aaPredicted RBP15.04■□□□□ -0
SMG6-215ENST00000574501 C1orf228Q6PIY5 440 aa15.04■□□□□ -0
SMG6-215ENST00000574501 SH2D5Q6ZV89 423 aa15.04■□□□□ -0
SMG6-215ENST00000574501 SV2AQ7L0J3 742 aa15.04■□□□□ -0
SMG6-215ENST00000574501 RCOR2Q8IZ40 523 aa15.04■□□□□ -0
SMG6-215ENST00000574501 KCTD17Q8N5Z5 321 aa15.04■□□□□ -0
SMG6-215ENST00000574501 ICA1LQ8NDH6 482 aa15.04■□□□□ -0
SMG6-215ENST00000574501 ZFP28Q8NHY6 868 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TRIM11Q96F44 468 aa15.04■□□□□ -0
SMG6-215ENST00000574501 CATSPER2Q96P56 530 aa15.04■□□□□ -0
SMG6-215ENST00000574501 SLC13A1Q9BZW2 595 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TMEM8AQ9HCN3 771 aa15.04■□□□□ -0
SMG6-215ENST00000574501 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
SMG6-215ENST00000574501 NDUFA13Q9P0J0 144 aa15.04■□□□□ -0
SMG6-215ENST00000574501 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
SMG6-215ENST00000574501 SNCAIPQ9Y6H5 919 aa15.04■□□□□ -0
SMG6-215ENST00000574501 NFASCO94856 1347 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TMEM150BA6NC51 233 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TMEM63AO94886 807 aa15.04■□□□□ -0
SMG6-215ENST00000574501 INHBAP08476 426 aa15.04■□□□□ -0
SMG6-215ENST00000574501 RAG1P15918 1043 aa15.04■□□□□ -0
SMG6-215ENST00000574501 RPL5P46777 297 aaKnown RBP15.04■□□□□ -0
SMG6-215ENST00000574501 NRLP54845 237 aa15.04■□□□□ -0
SMG6-215ENST00000574501 BTKQ06187 659 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TCHHL1Q5QJ38 904 aaPredicted RBP15.04■□□□□ -0
SMG6-215ENST00000574501 SPOCD1Q6ZMY3 1216 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TMC7Q7Z402 723 aa15.04■□□□□ -0
SMG6-215ENST00000574501 PPIL6Q8IXY8 311 aa15.04■□□□□ -0
SMG6-215ENST00000574501 E2F7Q96AV8 911 aa15.04■□□□□ -0
SMG6-215ENST00000574501 ZNF577Q9BSK1 485 aa15.04■□□□□ -0
SMG6-215ENST00000574501 EPB41L1Q9H4G0 881 aa15.04■□□□□ -0
SMG6-215ENST00000574501 LZTS1Q9Y250 596 aa15.04■□□□□ -0
SMG6-215ENST00000574501 COL24A1Q17RW2 1714 aa15.04■□□□□ -0
SMG6-215ENST00000574501 TNRC6CQ9HCJ0 1690 aaKnown RBP15.03■□□□□ -0
SMG6-215ENST00000574501 PEX3P56589 373 aa15.03■□□□□ -0
SMG6-215ENST00000574501 PSMC5P62195 406 aa15.03■□□□□ -0
SMG6-215ENST00000574501 SFSWAPQ12872 951 aaKnown RBP15.03■□□□□ -0
SMG6-215ENST00000574501 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
SMG6-215ENST00000574501 C12orf56Q8IXR9 622 aa15.03■□□□□ -0
SMG6-215ENST00000574501 NAT8LQ8N9F0 302 aa15.03■□□□□ -0
SMG6-215ENST00000574501 UBAP1Q9NZ09 502 aa15.03■□□□□ -0
SMG6-215ENST00000574501 USP21Q9UK80 565 aa15.03■□□□□ -0
SMG6-215ENST00000574501 ZBTB21Q9ULJ3 1066 aa15.03■□□□□ -0
SMG6-215ENST00000574501 COQ4Q9Y3A0 265 aa15.03■□□□□ -0
SMG6-215ENST00000574501 TCRBV9S1A1TA0A576 114 aa15.03■□□□□ -0
SMG6-215ENST00000574501 F8VP50 259 aa15.03■□□□□ -0
SMG6-215ENST00000574501 PMM2O15305 246 aa15.03■□□□□ -0
SMG6-215ENST00000574501 ITGAVP06756 1048 aa15.03■□□□□ -0
SMG6-215ENST00000574501 PMLP29590 882 aa15.03■□□□□ -0
SMG6-215ENST00000574501 GRAPQ13588 217 aa15.03■□□□□ -0
SMG6-215ENST00000574501 MYLK3Q32MK0 819 aa15.03■□□□□ -0
SMG6-215ENST00000574501 RABGAP1LQ5R372 815 aa15.03■□□□□ -0
SMG6-215ENST00000574501 MAP3K21Q5TCX8 1036 aa15.03■□□□□ -0
SMG6-215ENST00000574501 LMBRD2Q68DH5 695 aaPredicted RBP15.03■□□□□ -0
SMG6-215ENST00000574501 DENND5BQ6ZUT9 1274 aa15.03■□□□□ -0
SMG6-215ENST00000574501 ZFPM1Q8IX07 1006 aa15.03■□□□□ -0
SMG6-215ENST00000574501 GRAPLQ8TC17 118 aaPredicted RBP15.03■□□□□ -0
SMG6-215ENST00000574501 DCAF4Q8WV16 495 aa15.03■□□□□ -0
SMG6-215ENST00000574501 KIFC3Q9BVG8 833 aa15.03■□□□□ -0
SMG6-215ENST00000574501 C1orf21Q9H246 121 aa15.03■□□□□ -0
SMG6-215ENST00000574501 MRPL47Q9HD33 250 aaKnown RBP15.03■□□□□ -0
SMG6-215ENST00000574501 XPO7Q9UIA9 1087 aaKnown RBP15.03■□□□□ -0
SMG6-215ENST00000574501 APPL1Q9UKG1 709 aa15.03■□□□□ -0
SMG6-215ENST00000574501 ZNF232Q9UNY5 417 aa15.03■□□□□ -0
SMG6-215ENST00000574501 INPP5FQ9Y2H2 1132 aa15.03■□□□□ -0
SMG6-215ENST00000574501 PCDHB2Q9Y5E7 798 aa15.03■□□□□ -0
SMG6-215ENST00000574501 GOLGB1Q14789 3259 aaKnown RBP15.02■□□□□ -0
SMG6-215ENST00000574501 TRIM49D1C9J1S8 452 aa15.02■□□□□ -0
SMG6-215ENST00000574501 KLF11O14901 512 aa15.02■□□□□ -0
SMG6-215ENST00000574501 IL1BP01584 269 aa15.02■□□□□ -0
SMG6-215ENST00000574501 PROCP04070 461 aa15.02■□□□□ -0
SMG6-215ENST00000574501 ELK3P41970 407 aa15.02■□□□□ -0
SMG6-215ENST00000574501 GTF2IP78347 998 aa15.02■□□□□ -0
SMG6-215ENST00000574501 PEX6Q13608 980 aa15.02■□□□□ -0
SMG6-215ENST00000574501 CYLC2Q14093 348 aaPredicted RBP15.02■□□□□ -0
SMG6-215ENST00000574501 GK3PQ14409 553 aa15.02■□□□□ -0
SMG6-215ENST00000574501 GAB3Q8WWW8 586 aa15.02■□□□□ -0
SMG6-215ENST00000574501 LZICQ8WZA0 190 aa15.02■□□□□ -0
SMG6-215ENST00000574501 C7orf26Q96N11 449 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms