RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 FBXO44Q9H4M3 255 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 PLCB1Q9NQ66 1216 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 OBSL1O75147 1896 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 PATJQ8NI35 1801 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 MED7O43513 233 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 HMGA1P17096 107 aaKnown RBP13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 CEBPBP17676 345 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 BCAT1P54687 386 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 MAP3K7CLP57077 242 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 RAPGEF1Q13905 1077 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 KLHDC7AQ5VTJ3 777 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 CLEC20AQ6ZU45 233 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 LUZP1Q86V48 1076 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 NPAS3Q8IXF0 933 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 NEK11Q8NG66 645 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 TCEAL4Q96EI5 215 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 NECAB3Q96P71 396 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 KCNK16Q96T55 309 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZNF334Q9HCZ1 680 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 TRPM5Q9NZQ8 1165 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 CNTN6Q9UQ52 1028 aa13.51□□□□□ -0.25
TRAPPC1-206ENST00000573989 TPM3P06753 285 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 UCHL3P15374 230 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 YWHAQP27348 245 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 CCR2P41597 374 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 PDE6CP51160 858 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZNF132P52740 706 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 SLC5A3P53794 718 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 BPIFB4P59827 614 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 PTK2Q05397 1052 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 BST2Q10589 180 aaKnown RBP13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 TEAD2Q15562 447 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 CNGA2Q16280 664 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 GJB7Q6PEY0 223 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 GAREM2Q75VX8 874 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 PDZD8Q8NEN9 1154 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 SHKBP1Q8TBC3 707 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 OVCA2Q8WZ82 227 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 SHC3Q92529 594 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 ERGIC2Q96RQ1 377 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 SMOQ99835 787 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 TTLL2Q9BWV7 592 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 COL25A1Q9BXS0 654 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 UBXN6Q9BZV1 441 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 SIX2Q9NPC8 291 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 LIMD1Q9UGP4 676 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 TSPAN16Q9UKR8 245 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 ANAPC1Q9H1A4 1944 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 NUP210Q8TEM1 1887 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 MYO16Q9Y6X6 1858 aa13.5□□□□□ -0.25
TRAPPC1-206ENST00000573989 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 F11P03951 625 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 SETSIPP0DME0 302 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 GJA1P17302 382 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 GNA15P30679 374 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 CACNA2D1P54289 1103 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 SYCP1Q15431 976 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 GOLGA7BQ2TAP0 167 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 GPR158Q5T848 1215 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 STKLD1Q8NE28 680 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 FBXO32Q969P5 355 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 SPAG5Q96R06 1193 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 STK33Q9BYT3 514 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 TASP1Q9H6P5 420 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 IL21Q9HBE4 155 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZFP14Q9HCL3 533 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 SORCS3Q9UPU3 1222 aa13.49□□□□□ -0.25
TRAPPC1-206ENST00000573989 O00370 1275 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 DPYSL4O14531 572 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 THAP12O43422 761 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 MOSPD3O75425 235 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 BEST1O76090 585 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 ALADP13716 330 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 PFKLP17858 780 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 BRD2P25440 801 aaKnown RBP13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 AVPR1AP37288 418 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZNF445P59923 1031 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 CYP4F8P98187 520 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 APBA1Q02410 837 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 TAF10Q12962 218 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms