RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CYP4A22Q5TCH4 519 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 TAF3Q5VWG9 929 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 CLEC20AQ6ZU45 233 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 DENND5BQ6ZUT9 1274 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 GRASPQ7Z6J2 395 aaPredicted RBP15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 DNAJB7Q7Z6W7 309 aaPredicted RBP15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 DRC7Q8IY82 874 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 BAP1Q92560 729 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 PSMG2Q969U7 264 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 ZNF707Q96C28 371 aaPredicted RBP15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 MRFAP1L1Q96HT8 127 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 CEP295NLQ96MC4 621 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 SMOQ99835 787 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 NUCKS1Q9H1E3 243 aaKnown RBP15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 S1PR5Q9H228 398 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 PRDM6Q9NQX0 595 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 ASAH2Q9NR71 780 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 THEGQ9P2T0 379 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 FAM50BQ9Y247 325 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 CEP83Q9Y592 693 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 OBSL1O75147 1896 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 ANAPC1Q9H1A4 1944 aa15.35■□□□□ 0.05
NPLOC4-209ENST00000572760 A0A1W2PQJ5 194 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 BEST1O76090 585 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 RTN3O95197 1032 aaPredicted RBP15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 POU2F2P09086 479 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 SETSIPP0DME0 302 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 MYL4P12829 197 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 CASP14P31944 242 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 ZBED6P86452 979 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 PDE4CQ08493 712 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 AAK1Q2M2I8 961 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 TSR1Q2NL82 804 aaKnown RBP15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 LEXMQ3ZCV2 418 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 PABPC1LQ4VXU2 614 aaKnown RBP15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 PDZD4Q76G19 769 aaPredicted RBP15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 NUP93Q8N1F7 819 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 LEMD2Q8NC56 503 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 SMRP1Q8NCR6 262 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 STKLD1Q8NE28 680 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 SPATA17Q96L03 361 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 NECTIN4Q96NY8 510 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 GCNAQ96QF7 691 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 ZSWIM1Q9BR11 485 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 TTYH3Q9C0H2 523 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 HCFC1R1Q9NWW0 138 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 CAPN11Q9UMQ6 739 aa15.34■□□□□ 0.05
NPLOC4-209ENST00000572760 DOCK8Q8NF50 2099 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 XPO1O14980 1071 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 MBTPS2O43462 519 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 GYPCP04921 128 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 RHOP08100 348 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 MTMR3Q13615 1198 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 PUS10Q3MIT2 529 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 PTCRAQ6ISU1 281 aaPredicted RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 TTC30AQ86WT1 665 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 ZNF677Q86XU0 584 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 ZMIZ2Q8NF64 920 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 LRRC4Q9HBW1 653 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 CSNK1G1Q9HCP0 422 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 TMEM30AQ9NV96 361 aa15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 SEPT11Q9NVA2 429 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 DNMT3BQ9UBC3 853 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 UXTQ9UBK9 157 aaPredicted RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 MRPS23Q9Y3D9 190 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 USP15Q9Y4E8 981 aaPredicted RBP15.33■□□□□ 0.04
NPLOC4-209ENST00000572760 DENND4AQ7Z401 1863 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 ZNF197O14709 1029 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 ADCY5O95622 1261 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 FGF19O95750 216 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 FSHRP23945 695 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 YWHAQP27348 245 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 RGS7P49802 495 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 NTHL1P78549 312 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 TFF2Q03403 129 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 CBX2Q14781 532 aaPredicted RBP15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 DENND1BQ6P3S1 775 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 NOP9Q86U38 636 aaKnown RBP15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 PIGZQ86VD9 579 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 PASD1Q8IV76 773 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 FEZF2Q8TBJ5 459 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 EPS8L1Q8TE68 723 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 NOX5Q96PH1 765 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 SLITRK1Q96PX8 696 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 UBXN6Q9BZV1 441 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 FBXO44Q9H4M3 255 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 GRPEL1Q9HAV7 217 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 WDR6Q9NNW5 1121 aaKnown RBP15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 PNPLA8Q9NP80 782 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 CDH22Q9UJ99 828 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 PCDHGC3Q9UN70 934 aa15.32■□□□□ 0.04
NPLOC4-209ENST00000572760 MYO10Q9HD67 2058 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 GRXCR2A6NFK2 248 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 PAPLNO95428 1278 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 GABRR2P28476 465 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms