RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 PRSS33Q8NF86 280 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 CMASQ8NFW8 434 aaPredicted RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 ATOH1Q92858 354 aaPredicted RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 GAD1Q99259 594 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 ADPGKQ9BRR6 497 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 RHOBTB2Q9BYZ6 727 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 PLEKHA4Q9H4M7 779 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 GP6Q9HCN6 339 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 TUFT1Q9NNX1 390 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 IGSF9Q9P2J2 1179 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 ZMYM5Q9UJ78 669 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 KCNH3Q9ULD8 1083 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 TMA7Q9Y2S6 64 aaKnown RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 PRG3Q9Y2Y8 225 aaPredicted RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 MTCL1Q9Y4B5 1905 aaKnown RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 CAPN6Q9Y6Q1 641 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 LRRIQ4A6NIV6 560 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 BTBD18B2RXH4 712 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 CTDNEP1O95476 244 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 ARF4P18085 180 aaPredicted RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 MUTP22033 750 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 ARL2P36404 184 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 CLCN5P51795 746 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 NEK4P51957 841 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 DSG1Q02413 1049 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 MBTD1Q05BQ5 628 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 TDGQ13569 410 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 SNW1Q13573 536 aaKnown RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 CAPSQ13938 189 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 PPP2R5AQ15172 486 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 ME3Q16798 604 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 USP41Q3LFD5 358 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 HAUS3Q68CZ6 603 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 PDXDC1Q6P996 788 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 C12orf76Q8N812 135 aaPredicted RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 ZNF513Q8N8E2 541 aaPredicted RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 NSUN7Q8NE18 718 aaKnown RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 BCL7CQ8WUZ0 217 aaPredicted RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 CPB2Q96IY4 423 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 POLR3FQ9H1D9 316 aaPredicted RBP10.19□□□□□ -0.78
CIITA-208ENST00000572665 XPNPEP1Q9NQW7 623 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 MAN1C1Q9NR34 630 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 GJB4Q9NTQ9 266 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 WHRNQ9P202 907 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 FBXL21Q9UKT6 434 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 C2orf16Q68DN1 1984 aa10.19□□□□□ -0.78
CIITA-208ENST00000572665 SF3B1O75533 1304 aaKnown RBP eCLIP10.18□□□□□ -0.78
CIITA-208ENST00000572665 CCDC195A0A1B0GUA6 201 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 A0A1B0GUA9 196 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 N4BP3O15049 544 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 TADA2AO75478 443 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 WEE2P0C1S8 567 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 FDPSP14324 419 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 GLRA2P23416 452 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 SCNN1GP51170 649 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 OXCT1P55809 520 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 TNK2Q07912 1038 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 DSC1Q08554 894 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 TCF15Q12870 199 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 ELAVL2Q12926 359 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 MAPK6Q16659 721 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 EARS2Q5JPH6 523 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 LILRB2Q8N423 598 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 PIWIL2Q8TC59 973 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 MTMR9Q96QG7 549 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 RTP3Q9BQQ7 232 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 LLPHQ9BRT6 129 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 POLR3CQ9BUI4 534 aaPredicted RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 APOL6Q9BWW8 343 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 EIF2AQ9BY44 585 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 RAB34Q9BZG1 259 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 RXFP1Q9HBX9 757 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 ZDHHC7Q9NXF8 308 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 PRR13Q9NZ81 148 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 FNIP2Q9P278 1114 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 APEX2Q9UBZ4 518 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 PFDN2Q9UHV9 154 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 ADAM28Q9UKQ2 775 aa10.18□□□□□ -0.78
CIITA-208ENST00000572665 NOL7Q9UMY1 257 aaKnown RBP10.18□□□□□ -0.78
CIITA-208ENST00000572665 PLXNA3P51805 1871 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 PHLPP2Q6ZVD8 1323 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 ARHGEF35A5YM69 484 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 TEX28O15482 410 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 NPTXRO95502 500 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 IGHA1P01876 353 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 MCM7P33993 719 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
CIITA-208ENST00000572665 HMGN5P82970 282 aaKnown RBP10.17□□□□□ -0.78
CIITA-208ENST00000572665 FAM187BQ17R55 369 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 SV2CQ496J9 727 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 FUT10Q6P4F1 479 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 ZDHHC13Q8IUH4 622 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 RNF168Q8IYW5 571 aaPredicted RBP10.17□□□□□ -0.78
CIITA-208ENST00000572665 FAM181AQ8N9Y4 354 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 DEPTORQ8TB45 409 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 PIGOQ8TEQ8 1089 aa10.17□□□□□ -0.78
CIITA-208ENST00000572665 SMG7Q92540 1137 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms