RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 SSR1P43307 286 aaKnown RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 TAF6P49848 677 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 TMEM240Q5SV17 173 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 ARHGAP17Q68EM7 881 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.512e-8■■■■■ 28.9
RPAIN-208ENST00000571043 LIMS2Q7Z4I7 341 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 TSEN2Q8NCE0 465 aaKnown RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 LRRC45Q96CN5 670 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 TRIM51Q9BSJ1 452 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 PCDHB7Q9Y5E2 793 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 F8VP50 259 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 GOLGA8SH3BPF8 625 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 AGPSO00116 658 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 HSF2BPO75031 334 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 RFC1P35251 1148 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 COPS2P61201 443 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 KLF1Q13351 362 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 ACAP1Q15027 740 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 SOWAHAQ2M3V2 549 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 SV2CQ496J9 727 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 PKDCCQ504Y2 493 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 PSRC1Q6PGN9 363 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 SYDE1Q6ZW31 735 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 OTOP2Q7RTS6 562 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 POLNQ7Z5Q5 900 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 DDX42Q86XP3 938 aaKnown RBP eCLIP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 CCDC105Q8IYK2 499 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 GSTCDQ8NEC7 633 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 OSBPL8Q9BZF1 889 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 FEZ2Q9UHY8 353 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-208ENST00000571043 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
RPAIN-208ENST00000571043 INPPL1O15357 1258 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 CAPN15O75808 1086 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 SYF2O95926 243 aaKnown RBP18.22■□□□□ 0.51
RPAIN-208ENST00000571043 RALAP11233 206 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 PSMA2P25787 234 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 PTPN7P35236 360 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 GOLGA7BQ2TAP0 167 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 DAB2IPQ5VWQ8 1189 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 DPH6Q7L8W6 267 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 CCDC50Q8IVM0 306 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 CRYBG2Q8N1P7 616 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 RNF169Q8NCN4 708 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 OR6B3Q8NGW1 331 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 UBA3Q8TBC4 463 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 TOP1MTQ969P6 601 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 GAD1Q99259 594 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 FAM129AQ9BZQ8 928 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 RSAD1Q9HA92 442 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 TJP2Q9UDY2 1190 aa18.22■□□□□ 0.51
RPAIN-208ENST00000571043 FNDC1Q4ZHG4 1894 aaPredicted RBP18.22■□□□□ 0.51
RPAIN-208ENST00000571043 LAMA2P24043 3122 aaKnown RBP18.21■□□□□ 0.51
RPAIN-208ENST00000571043 ARL5CA6NH57 179 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 A8MXQ7 604 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 POLR3GO15318 223 aaPredicted RBP18.21■□□□□ 0.51
RPAIN-208ENST00000571043 ECEL1O95672 775 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 GGCXP38435 758 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 SNX16P57768 344 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
RPAIN-208ENST00000571043 ACOT1Q86TX2 421 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 NPAS4Q8IUM7 802 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 IQCKQ8N0W5 287 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 JOSD2Q8TAC2 188 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 GRK7Q8WTQ7 553 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 STK32AQ8WU08 396 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 ZFP42Q96MM3 310 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 PPP1R10Q96QC0 940 aaKnown RBP18.21■□□□□ 0.51
RPAIN-208ENST00000571043 DCLK3Q9C098 648 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 NEUROG2Q9H2A3 272 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 DPH5Q9H2P9 285 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 METTL5Q9NRN9 209 aaKnown RBP18.21■□□□□ 0.51
RPAIN-208ENST00000571043 RNF19AQ9NV58 838 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 SLC38A7Q9NVC3 462 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 MIOSQ9NXC5 875 aa18.21■□□□□ 0.51
RPAIN-208ENST00000571043 PTPRSQ13332 1948 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 PTGESO14684 152 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 SPTLC1O15269 473 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 OPA1O60313 960 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 AMHP03971 560 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 KRT1P04264 644 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-208ENST00000571043 AFF1P51825 1210 aaKnown RBP18.2■□□□□ 0.5
RPAIN-208ENST00000571043 SOX4Q06945 474 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-208ENST00000571043 CCNG2Q16589 344 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 HADHQ16836 314 aaKnown RBP18.2■□□□□ 0.5
RPAIN-208ENST00000571043 CLLU1OSQ5K130 101 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 CFAP58Q5T655 872 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 PPP1R26Q5T8A7 1209 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-208ENST00000571043 TOP6BLQ8N6T0 577 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 C12orf29Q8N999 325 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 KBTBD7Q8WVZ9 684 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 C1orf54Q8WWF1 131 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 HERVK_113Q902F9 699 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 SLITRK1Q96PX8 696 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 SH3GL2Q99962 352 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 HERPUD2Q9BSE4 406 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 SLC4A5Q9BY07 1137 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms