RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 TLCD1Q96CP7 247 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 CDHR1Q96JP9 859 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 TEKT3Q9BXF9 490 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 FAM129AQ9BZQ8 928 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 TMEM39BQ9GZU3 492 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 ISCUQ9H1K1 167 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 MS4A5Q9H3V2 200 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 ZNF277Q9NRM2 450 aaPredicted RBP8.46□□□□□ -1.05
TCF4-246ENST00000570287 TRMT13Q9NUP7 481 aaKnown RBP8.46□□□□□ -1.05
TCF4-246ENST00000570287 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.05
TCF4-246ENST00000570287 LRRC42Q9Y546 428 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 TLL2Q9Y6L7 1015 aa8.46□□□□□ -1.05
TCF4-246ENST00000570287 ATP8B3O60423 1300 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 COL4A5P29400 1685 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 A0A087X0T9 212 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 RNF8O76064 485 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 FAM228BP0C875 321 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 HARSP12081 509 aaKnown RBP8.46□□□□□ -1.06
TCF4-246ENST00000570287 NQO1P15559 274 aaKnown RBP8.46□□□□□ -1.06
TCF4-246ENST00000570287 TMOD1P28289 359 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 ATICP31939 592 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 PSMC2P35998 433 aaKnown RBP8.46□□□□□ -1.06
TCF4-246ENST00000570287 PRKCIP41743 596 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 SESN3P58005 492 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 GTF2H3Q13889 308 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 DCAF17Q5H9S7 520 aaPredicted RBP8.46□□□□□ -1.06
TCF4-246ENST00000570287 CCDC149Q6ZUS6 474 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 SLC35C1Q96A29 364 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 RIT2Q99578 217 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.46□□□□□ -1.06
TCF4-246ENST00000570287 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
TCF4-246ENST00000570287 EHD2Q9NZN4 543 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 ZMYM2Q9UBW7 1377 aa8.46□□□□□ -1.06
TCF4-246ENST00000570287 TMEM110-MUSTN1A8MSY1 372 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 BUB1O43683 1085 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 PQBP1O60828 265 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 KRT38O76015 456 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ICAM1P05362 532 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ARP10275 920 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 BCRP11274 1271 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ACTN1P12814 892 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CNTFP26441 200 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CTCFP49711 727 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 HSD17B4P51659 736 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CUL1Q13616 776 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 SPDYCQ5MJ68 293 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 SAPCD2Q86UD0 394 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ZBED3Q96IU2 234 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 MXRA8Q9BRK3 442 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 SMARCAL1Q9NZC9 954 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 WDR35Q9P2L0 1181 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 METRNQ9UJH8 293 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CES2O00748 559 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CLIC2O15247 247 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 NCK2O43639 380 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 OAS1P00973 400 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 POU3F2P20265 443 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 KLRC1P26715 233 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 NMT1P30419 496 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 GRM5P41594 1212 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 RAD52P43351 418 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 RECQLP46063 649 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 CASP4P49662 377 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 UBXN2AP68543 259 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CACNB2Q08289 660 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 TCERG1LQ5VWI1 586 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 TDRD10Q5VZ19 366 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 MIGA2Q7L4E1 593 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 NIPA1Q7RTP0 329 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ZNF720Q7Z2F6 126 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 LMNTD2Q8IXW0 634 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ANKS4BQ8N8V4 417 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 C19orf47Q8N9M1 422 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 FIZ1Q96SL8 496 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 SLC9A7Q96T83 725 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 BCAS3Q9H6U6 928 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ARHGEF3Q9NR81 526 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 AGAP1Q9UPQ3 857 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 E7ENQ6 273 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 PALMO75781 387 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 RARAP10276 462 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 GNAT1P11488 350 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 GNAZP19086 355 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 MATR3P43243 847 aaKnown RBP eCLIP8.45□□□□□ -1.06
TCF4-246ENST00000570287 JAM2P57087 298 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 IL2P60568 153 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 GHRHRQ02643 423 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 KRT72Q14CN4 511 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 ASRGL1Q7L266 308 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CHST15Q7LFX5 561 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 ZNF571Q7Z3V5 609 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 UBE2Q1Q7Z7E8 422 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 CDAN1Q8IWY9 1227 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 FAM81AQ8TBF8 368 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 XPO6Q96QU8 1125 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 GORASP1Q9BQQ3 440 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 OSBPL1AQ9BXW6 950 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms