RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DSPP15924 2871 aaKnown RBP12.92□□□□□ -0.34
CAPN3-220ENST00000569827 LEFTY2O00292 366 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 RHOBTB1O94844 696 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 ABL1P00519 1130 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 TMEM191BP0C7N4 346 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 HDCP19113 662 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 SLC6A11P48066 632 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 SHC2P98077 582 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 AMPD2Q01433 879 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 CYP27A1Q02318 531 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 KDSRQ06136 332 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 POSTNQ15063 836 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 SH3PXD2AQ5TCZ1 1133 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 PMS2CLQ68D20 193 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 KIAA1211LQ6NV74 962 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 FILIP1Q7Z7B0 1213 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 C12orf40Q86WS4 652 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 NT5DC4Q86YG4 428 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 TMEM86AQ8N2M4 240 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 ACDQ96AP0 544 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 EBF1Q9UH73 591 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
CAPN3-220ENST00000569827 ITGA11Q9UKX5 1188 aa12.92□□□□□ -0.34
CAPN3-220ENST00000569827 PCDH15Q96QU1 1955 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 GABRDO14764 452 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 CYP17A1P05093 508 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 GRIK1P39086 918 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 IRX4P78413 519 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 CFAP221Q4G0U5 840 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 EMC10Q5UCC4 262 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 FAM171BQ6P995 826 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 UNQ6494/PRO21346Q6UXR6 183 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 CBWD2Q8IUF1 395 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 ALLCQ8N6M5 410 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 TOP6BLQ8N6T0 577 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 LRRC52Q8N7C0 313 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 DEFB124Q8NES8 71 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 CACTINQ8WUQ7 758 aaKnown RBP12.91□□□□□ -0.34
CAPN3-220ENST00000569827 PIGKQ92643 395 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 ELMO3Q96BJ8 720 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 MRPL45Q9BRJ2 306 aaKnown RBP12.91□□□□□ -0.34
CAPN3-220ENST00000569827 RNF38Q9H0F5 515 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 TMEM30AQ9NV96 361 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 GDAP2Q9NXN4 497 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 MAGEC2Q9UBF1 373 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-220ENST00000569827 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 ARHGAP26Q9UNA1 814 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 EXOC7Q9UPT5 735 aa12.91□□□□□ -0.34
CAPN3-220ENST00000569827 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-220ENST00000569827 NBEAQ8NFP9 2946 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 CDX4O14627 284 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-220ENST00000569827 KLF8O95600 359 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-220ENST00000569827 BMP15O95972 392 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 HOXB3P14651 431 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-220ENST00000569827 GAP43P17677 238 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 PCSK1P29120 753 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 ABCD1P33897 745 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 TIE1P35590 1138 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 MAPK8P45983 427 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 RBP5P82980 135 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 SV2BQ7L1I2 683 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 BRAPQ7Z569 592 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 GPD1LQ8N335 351 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 DEFB119Q8N690 84 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 PDILTQ8N807 584 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 FSIP1Q8NA03 581 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 TXNDC5Q8NBS9 432 aaKnown RBP12.9□□□□□ -0.34
CAPN3-220ENST00000569827 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 ANKRD36BP1Q96IX9 119 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 MMS19Q96T76 1030 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 DPEP3Q9H4B8 488 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 TMEM9BQ9NQ34 198 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 PANK4Q9NVE7 773 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 INTS13Q9NVM9 706 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 CCDC39Q9UFE4 941 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 ZMIZ1Q9ULJ6 1067 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 MMP17Q9ULZ9 603 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 CPQQ9Y646 472 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 FREM2Q5SZK8 3169 aa12.9□□□□□ -0.34
CAPN3-220ENST00000569827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 F8VP50 259 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 SGK1O00141 431 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 CLDN5O00501 218 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
CAPN3-220ENST00000569827 NFATC1O95644 943 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 PROS1P07225 676 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 GARTP22102 1010 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 PTGER3P43115 390 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 LHX1P48742 406 aa12.89□□□□□ -0.35
CAPN3-220ENST00000569827 POU5F1Q01860 360 aaKnown RBP12.89□□□□□ -0.35
CAPN3-220ENST00000569827 NR1H3Q13133 447 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms