RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ARSEP51690 589 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF143P52747 638 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 NDST1P52848 882 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 YARSP54577 528 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SLC25A11Q02978 314 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 KRT17Q04695 432 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ADCY2Q08462 1091 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 PDCLQ13371 301 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SLC29A2Q14542 456 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 OASLQ15646 514 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 HADHQ16836 314 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SWI5Q1ZZU3 235 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 KIZQ2M2Z5 673 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ATP13A4Q4VNC1 1196 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 BOLA3Q53S33 107 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 TFDP3Q5H9I0 405 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 PRAMEF19Q5SWL8 479 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 UBXN11Q5T124 520 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 DMRTA1Q5VZB9 504 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 C9orf57Q5W0N0 161 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 DENND2CQ68D51 928 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 MFSD5Q6N075 450 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CYP4F22Q6NT55 531 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 BBS12Q6ZW61 710 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 DPH6Q7L8W6 267 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CATSPER4Q7RTX7 472 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ANKS1BQ7Z6G8 1248 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 RPAINQ86UA6 219 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 HOOK3Q86VS8 718 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ZDHHC17Q8IUH5 632 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ALLCQ8N6M5 410 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF784Q8NCA9 323 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 BEST2Q8NFU1 509 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SLC35B2Q8TB61 432 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SLC35F5Q8WV83 523 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 RAPGEF5Q92565 580 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SNX27Q96L92 541 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ZMAT2Q96NC0 199 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SCLT1Q96NL6 688 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 MCEEQ96PE7 176 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CPXM1Q96SM3 734 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 OCSTAMPQ9BR26 566 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CNPY3Q9BT09 278 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 HEMGNQ9BXL5 484 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 DNAI2Q9GZS0 605 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 AP5M1Q9H0R1 490 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 EPN3Q9H201 632 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SMYD3Q9H7B4 428 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CNOT10Q9H9A5 744 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ZFYVE28Q9HCC9 887 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ASNSD1Q9NWL6 643 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 FLRT1Q9NZU1 646 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CWC15Q9P013 229 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CPA4Q9UI42 421 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ANAPC5Q9UJX4 755 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 GGA2Q9UJY4 613 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 UBQLN1Q9UMX0 589 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 PLXNB2O15031 1838 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 SMIM28A0A1B0GU29 152 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 FAM170AA1A519 330 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF487B1APH4 448 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ALOX15BO15296 676 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 CA12O43570 354 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 XPOTO43592 962 aaKnown RBP5.65□□□□□ -1.5
SF3B3-213ENST00000569687 PRMT3O60678 531 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 DUSP11O75319 330 aaKnown RBP5.65□□□□□ -1.5
SF3B3-213ENST00000569687 LRCH4O75427 683 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 NPTXRO95502 500 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 TTC4O95801 387 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 AGTP01019 485 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ERBB2P04626 1255 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ATF2P15336 505 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 TCF4P15884 667 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 KDELR1P24390 212 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 LSP1P33241 339 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 RAP1GAPP47736 663 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 APLP1P51693 650 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ITGA8P53708 1063 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 VCPP55072 806 aaKnown RBP5.65□□□□□ -1.5
SF3B3-213ENST00000569687 PPP2R2AP63151 447 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 GNGT1P63211 74 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 SLC6A3Q01959 620 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 IFFO1Q0D2I5 559 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 NOGQ13253 232 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 SNX1Q13596 522 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 SNX17Q15036 470 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 EML3Q32P44 896 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 KRT71Q3SY84 523 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 CYP4A22Q5TCH4 519 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 KCTD16Q68DU8 428 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 TXNRD3NBQ6F5E7 133 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 HIBCHQ6NVY1 386 aaPredicted RBP5.65□□□□□ -1.5
SF3B3-213ENST00000569687 TAF2Q6P1X5 1199 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 BRICD5Q6PL45 260 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 SCARA5Q6ZMJ2 495 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF365Q70YC5 407 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 TLK2Q86UE8 772 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 CCDC50Q8IVM0 306 aa5.65□□□□□ -1.5
SF3B3-213ENST00000569687 ZCCHC9Q8N567 271 aaKnown RBP5.65□□□□□ -1.5
SF3B3-213ENST00000569687 SH2D3CQ8N5H7 860 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms