RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SCML4Q8N228 414 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 CCDC42Q96M95 316 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 SMOQ99835 787 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 LPIN3Q9BQK8 851 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 FBXO44Q9H4M3 255 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 SFXN1Q9H9B4 322 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 MTMR10Q9NXD2 777 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 ARHGAP20Q9P2F6 1191 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 YIPF1Q9Y548 306 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 PLXNA3P51805 1871 aa24.78■■□□□ 1.56
RAB40C-212ENST00000569575 PRRC2BQ5JSZ5 2229 aaKnown RBP24.78■■□□□ 1.56
RAB40C-212ENST00000569575 MMEP08473 750 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 EPCAMP16422 314 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 MAP3K7CLP57077 242 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 CTC1Q2NKJ3 1217 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 ZNF571Q7Z3V5 609 aaPredicted RBP24.77■■□□□ 1.56
RAB40C-212ENST00000569575 SCN4BQ8IWT1 228 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 NUP93Q8N1F7 819 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 SLC7A14Q8TBB6 771 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 SECISBP2LQ93073 1101 aaKnown RBP24.77■■□□□ 1.56
RAB40C-212ENST00000569575 VCPIP1Q96JH7 1222 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 UXTQ9UBK9 157 aaPredicted RBP24.77■■□□□ 1.56
RAB40C-212ENST00000569575 SLC27A5Q9Y2P5 690 aa24.77■■□□□ 1.56
RAB40C-212ENST00000569575 LAMA2P24043 3122 aaKnown RBP24.77■■□□□ 1.56
RAB40C-212ENST00000569575 F8VP50 259 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 CSPG5O95196 566 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 FGF19O95750 216 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 SKILP12757 684 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 PPP3CCP48454 512 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 RAB41Q5JT25 222 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 DENND5BQ6ZUT9 1274 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 CCDC186Q7Z3E2 898 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 TMEM110Q86TL2 294 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 PIGZQ86VD9 579 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 ZDHHC17Q8IUH5 632 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 SLC30A5Q8TAD4 765 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 SLC20A1Q8WUM9 679 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 PABPC5Q96DU9 382 aaKnown RBP24.76■■□□□ 1.55
RAB40C-212ENST00000569575 TRMT2BQ96GJ1 504 aaKnown RBP24.76■■□□□ 1.55
RAB40C-212ENST00000569575 MYRFLQ96LU7 910 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 ZNF512Q96ME7 567 aaPredicted RBP24.76■■□□□ 1.55
RAB40C-212ENST00000569575 FAM161BQ96MY7 647 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 BAG1Q99933 345 aaPredicted RBP24.76■■□□□ 1.55
RAB40C-212ENST00000569575 SLC4A5Q9BY07 1137 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 CRISPLD1Q9H336 500 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 DEF6Q9H4E7 631 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 IL37Q9NZH6 218 aa24.76■■□□□ 1.55
RAB40C-212ENST00000569575 SART1O43290 800 aaKnown RBP24.75■■□□□ 1.55
RAB40C-212ENST00000569575 UNGP13051 313 aaPredicted RBP24.75■■□□□ 1.55
RAB40C-212ENST00000569575 NOMO3P69849 1222 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 CENPCQ03188 943 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 CCDC142Q17RM4 750 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 CLEC16AQ2KHT3 1053 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 C10orf76Q5T2E6 689 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 TAF3Q5VWG9 929 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 DENND1BQ6P3S1 775 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 ZMIZ2Q8NF64 920 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 UBA3Q8TBC4 463 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 IPO4Q8TEX9 1081 aaKnown RBP24.75■■□□□ 1.55
RAB40C-212ENST00000569575 PSMG2Q969U7 264 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 PPP1R9BQ96SB3 815 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 KCNK16Q96T55 309 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 PRKD2Q9BZL6 878 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 NHEJ1Q9H9Q4 299 aaPredicted RBP24.75■■□□□ 1.55
RAB40C-212ENST00000569575 LRRC4Q9HBW1 653 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 CHD7Q9P2D1 2997 aa24.75■■□□□ 1.55
RAB40C-212ENST00000569575 SPDYE4A6NLX3 237 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 FBXO21O94952 628 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 FOSL2P15408 326 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 CYLC1P35663 651 aaPredicted RBP24.74■■□□□ 1.55
RAB40C-212ENST00000569575 NSFP46459 744 aaKnown RBP24.74■■□□□ 1.55
RAB40C-212ENST00000569575 ITIH3Q06033 890 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 TWF1Q12792 350 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 TAF12Q16514 161 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 SLC18A3Q16572 532 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 DDR2Q16832 855 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 ERICH1Q86X53 443 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 PHF13Q86YI8 300 aaPredicted RBP24.74■■□□□ 1.55
RAB40C-212ENST00000569575 OVCA2Q8WZ82 227 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 GUCD1Q96NT3 240 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 TTLL2Q9BWV7 592 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 IGFLR1Q9H665 355 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 LUC7LQ9NQ29 371 aaKnown RBP24.74■■□□□ 1.55
RAB40C-212ENST00000569575 CNGB3Q9NQW8 809 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 ADAMTS1Q9UHI8 967 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 STRIP2Q9ULQ0 834 aa24.74■■□□□ 1.55
RAB40C-212ENST00000569575 TRANK1O15050 2925 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 NCANO14594 1321 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 FAM92AA1XBS5 289 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 HHLA1C9JL84 531 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 TNFRSF10BO14763 440 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 AKR1B10O60218 316 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 RTN2O75298 545 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 BEST1O76090 585 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 SPATA31D3P0C874 917 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 ATF6P18850 670 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 EIF4A3P38919 411 aaKnown RBP24.73■■□□□ 1.55
RAB40C-212ENST00000569575 GABRB2P47870 512 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 PDCLQ13371 301 aa24.73■■□□□ 1.55
RAB40C-212ENST00000569575 ASTE1Q2TB18 679 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms