RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 LEXMQ3ZCV2 418 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 PKDCCQ504Y2 493 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 ATAT1Q5SQI0 421 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 SFMBT2Q5VUG0 894 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 TMC6Q7Z403 805 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 NOP9Q86U38 636 aaKnown RBP17.71■□□□□ 0.43
COMMD4-224ENST00000568877 EPS8L1Q8TE68 723 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 CORO1BQ9BR76 489 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 UBXN6Q9BZV1 441 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 NUCKS1Q9H1E3 243 aaKnown RBP17.71■□□□□ 0.43
COMMD4-224ENST00000568877 AIPL1Q9NZN9 384 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 DNMT3BQ9UBC3 853 aaKnown RBP17.71■□□□□ 0.43
COMMD4-224ENST00000568877 PCDHGC3Q9UN70 934 aa17.71■□□□□ 0.43
COMMD4-224ENST00000568877 CFHP08603 1231 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 TPM1P09493 284 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 SETSIPP0DME0 302 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 CSH1P0DML2 217 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 CSH2P0DML3 217 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 CASP14P31944 242 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 KRT9P35527 623 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 SMAD4Q13485 552 aaKnown RBP17.7■□□□□ 0.42
COMMD4-224ENST00000568877 MTMR3Q13615 1198 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 TAF12Q16514 161 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 ASIC2Q16515 512 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 MEA1Q16626 185 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 DENND5BQ6ZUT9 1274 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 IRF2BP2Q7Z5L9 587 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 GRASPQ7Z6J2 395 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-224ENST00000568877 NUP93Q8N1F7 819 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 STKLD1Q8NE28 680 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 DDX1Q92499 740 aaKnown RBP17.7■□□□□ 0.42
COMMD4-224ENST00000568877 RIPOR3Q96MK2 946 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 PNPLA8Q9NP80 782 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 CDH22Q9UJ99 828 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
COMMD4-224ENST00000568877 XIRP2A4UGR9 3374 aa17.7■□□□□ 0.42
COMMD4-224ENST00000568877 PTPRDP23468 1912 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 TNFRSF10BO14763 440 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 XPO1O14980 1071 aaKnown RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 MBTPS2O43462 519 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 ADCY5O95622 1261 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 HMGA1P17096 107 aaKnown RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 MTHFRP42898 656 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 CDR2Q01850 454 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 TBX2Q13207 712 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 TAF3Q5VWG9 929 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 PIGZQ86VD9 579 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 HS6ST3Q8IZP7 471 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 SLC35F5Q8WV83 523 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 SUSD6Q92537 303 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 SYN2Q92777 582 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 SECISBP2LQ93073 1101 aaKnown RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 LRRC3Q9BY71 257 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 LHX5Q9H2C1 402 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 PDCL3Q9H2J4 239 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 GRPEL1Q9HAV7 217 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 ASAH2Q9NR71 780 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 EHD2Q9NZN4 543 aa17.69■□□□□ 0.42
COMMD4-224ENST00000568877 MAGED2Q9UNF1 606 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 USP15Q9Y4E8 981 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-224ENST00000568877 GRXCR2A6NFK2 248 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 TULP2O00295 520 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 RTN3O95197 1032 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 RHOP08100 348 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 GPD2P43304 727 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 PLA2G4AP47712 749 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 SLC5A3P53794 718 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 EPHA5P54756 1037 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 USP46P62068 366 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 NTHL1P78549 312 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 TFF2Q03403 129 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 PABPC1LQ4VXU2 614 aaKnown RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 CYP4A22Q5TCH4 519 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 E4F1Q66K89 784 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 TMC8Q8IU68 726 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 LEMD2Q8NC56 503 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 SLC20A1Q8WUM9 679 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 TRMT2BQ96GJ1 504 aaKnown RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 MYRFLQ96LU7 910 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 NECTIN4Q96NY8 510 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 ZNF334Q9HCZ1 680 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 WDR6Q9NNW5 1121 aaKnown RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 AVENQ9NQS1 362 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-224ENST00000568877 COMMD8Q9NX08 183 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 THEGQ9P2T0 379 aa17.68■□□□□ 0.42
COMMD4-224ENST00000568877 FGF19O95750 216 aa17.67■□□□□ 0.42
COMMD4-224ENST00000568877 MMEP08473 750 aa17.67■□□□□ 0.42
COMMD4-224ENST00000568877 CHRNB2P17787 502 aa17.67■□□□□ 0.42
COMMD4-224ENST00000568877 CBX2Q14781 532 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-224ENST00000568877 PUS10Q3MIT2 529 aaKnown RBP17.67■□□□□ 0.42
COMMD4-224ENST00000568877 PDZD4Q76G19 769 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-224ENST00000568877 GPRIN1Q7Z2K8 1008 aa17.67■□□□□ 0.42
COMMD4-224ENST00000568877 PASD1Q8IV76 773 aa17.67■□□□□ 0.42
COMMD4-224ENST00000568877 SCAMP5Q8TAC9 235 aa17.67■□□□□ 0.42
COMMD4-224ENST00000568877 KCTD13Q8WZ19 329 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms