RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 TOGARAM2Q6ZUX3 1019 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 ADGRG2Q8IZP9 1017 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 CRELD1Q96HD1 420 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 ARHGEF4Q9NR80 690 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 CPSF3Q9UKF6 684 aaKnown RBP17.39■□□□□ 0.37
CLK3-223ENST00000568488 DERAQ9Y315 318 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 NPHP3-ACAD11A0A0J9YXS1 232 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 ACAT1P24752 427 aaKnown RBP17.38■□□□□ 0.37
CLK3-223ENST00000568488 ACOT2P49753 483 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 ZXDBP98169 803 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 RESTQ13127 1097 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 GNL2Q13823 731 aaKnown RBP17.38■□□□□ 0.37
CLK3-223ENST00000568488 SV2CQ496J9 727 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 HSPA12BQ96MM6 686 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 LARSQ9P2J5 1176 aaKnown RBP17.38■□□□□ 0.37
CLK3-223ENST00000568488 GTF3C4Q9UKN8 822 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 PLXNB3Q9ULL4 1909 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 SCN1AP35498 2009 aa17.38■□□□□ 0.37
CLK3-223ENST00000568488 ACACAQ13085 2346 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 A0A0B4J269 797 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 A0A1W2PQD8 194 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 TCF3P15923 654 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 GRIA2P42262 883 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 TNFRSF4P43489 277 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 KIR2DL1P43626 348 aaPredicted RBP17.37■□□□□ 0.37
CLK3-223ENST00000568488 PDE6CP51160 858 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 NCKAP1LP55160 1127 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 C12orf40Q86WS4 652 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 SPATA2LQ8IUW3 424 aaPredicted RBP17.37■□□□□ 0.37
CLK3-223ENST00000568488 SLC41A1Q8IVJ1 513 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 SETD7Q8WTS6 366 aaKnown RBP17.37■□□□□ 0.37
CLK3-223ENST00000568488 PLIN2Q99541 437 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 CCSER1Q9C0I3 900 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 ASB7Q9H672 318 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 DDX43Q9NXZ2 648 aaKnown RBP17.37■□□□□ 0.37
CLK3-223ENST00000568488 CACNA2D2Q9NY47 1150 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 CALCOCO1Q9P1Z2 691 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
CLK3-223ENST00000568488 ASXL3Q9C0F0 2248 aa17.37■□□□□ 0.37
CLK3-223ENST00000568488 TBC1D3BA6NDS4 549 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 ZBTB24O43167 697 aaPredicted RBP17.36■□□□□ 0.37
CLK3-223ENST00000568488 GJB3O75712 270 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 GABRG2P18507 467 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 WASP42768 502 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 CYP4F3Q08477 520 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 MARCH9Q86YJ5 346 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 SYT2Q8N9I0 419 aaPredicted RBP17.36■□□□□ 0.37
CLK3-223ENST00000568488 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
CLK3-223ENST00000568488 ERLEC1Q96DZ1 483 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 C8orf76Q96K31 380 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 ACBD6Q9BR61 282 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 FOXP1Q9H334 677 aaPredicted RBP17.36■□□□□ 0.37
CLK3-223ENST00000568488 ABCB6Q9NP58 842 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 SMPD4Q9NXE4 827 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 CYP8B1Q9UNU6 501 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 C2CD2Q9Y426 696 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 PCDH15Q96QU1 1955 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 URB1O60287 2271 aaKnown RBP17.36■□□□□ 0.37
CLK3-223ENST00000568488 APC2O95996 2303 aa17.36■□□□□ 0.37
CLK3-223ENST00000568488 TCHHQ07283 1943 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 CEP192Q8TEP8 1941 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 IGHV1OR15-9A0A0B4J2B8 117 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 SLC9A3R1O14745 358 aaPredicted RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 ABL1P00519 1130 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 CHRM1P11229 460 aaPredicted RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 EIF2DP41214 584 aaKnown RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 MYL7Q01449 175 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 CCDC142Q17RM4 750 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 INTS6LQ5JSJ4 861 aaKnown RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 RHBDF2Q6PJF5 856 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 PDCL2Q8N4E4 241 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 NAT16Q8N8M0 369 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 UBL7Q96S82 380 aaPredicted RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 FAM124BQ9H5Z6 455 aaPredicted RBP17.35■□□□□ 0.37
CLK3-223ENST00000568488 TRPM5Q9NZQ8 1165 aa17.35■□□□□ 0.37
CLK3-223ENST00000568488 A0A0A0MRY4 1105 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 TRABD2BA6NFA1 517 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 GOLGA8CPA6NN73 597 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.34■□□□□ 0.37
CLK3-223ENST00000568488 K7ENM7 598 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 NDUFS2O75306 463 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 ADH1CP00326 375 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 PIGRP01833 764 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 PLA2G4BP0C869 781 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 ADH5P11766 374 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 HOXB2P14652 356 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 GNSP15586 552 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 MAOBP27338 520 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 MYH11P35749 1972 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 SYCP2LQ5T4T6 812 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 ADALQ6DHV7 355 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 SLC39A4Q6P5W5 647 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 TMPRSS7Q7RTY8 843 aa17.34■□□□□ 0.37
CLK3-223ENST00000568488 MYCT1Q8N699 235 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms