RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TFDP3Q5H9I0 405 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 FSCBQ5H9T9 825 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 FAM71AQ8IYT1 594 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 TDRD3Q9H7E2 651 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 ARHGEF38Q9NXL2 777 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 AURKCQ9UQB9 309 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 MYH7P12883 1935 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 MYOCOSA0A1B0GUC4 107 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 KLHL2O95198 593 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 CYP1A2P05177 515 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 FGFR3P22607 806 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 RGS2P41220 211 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 BCAR1P56945 870 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 DLG1Q12959 904 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 DCTN2Q13561 401 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 TTC13Q8NBP0 860 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 KCNK16Q96T55 309 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 MMP19Q99542 508 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 DDX4Q9NQI0 724 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 WARS2Q9UGM6 360 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 TRPC5Q9UL62 973 aaPredicted RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 OAS1P00973 400 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 ADRB2P07550 413 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 CCR3P51677 355 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 WDR72Q3MJ13 1102 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 TTC39BQ5VTQ0 682 aaPredicted RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 PLA2G4CQ9UP65 541 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 AFDNP55196 1824 aaKnown RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 C15orf38-AP3S2A0A0A6YYH1 394 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 LIASO43766 372 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 CSPG5O95196 566 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 OSBPP22059 807 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 ANKRD22Q5VYY1 191 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 GPAT2Q6NUI2 795 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 ARPINQ7Z6K5 226 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 GPD1LQ8N335 351 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 HERPUD2Q9BSE4 406 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 RGPD8O14715 1765 aaPredicted RBP11.35□□□□□ -0.59
PALB2-206ENST00000568219 UBE4BO95155 1302 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 RNASEH1O60930 286 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 CASP2P42575 452 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 DCAF4Q8WV16 495 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 APOPT1Q96IL0 206 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 HAUS8Q9BT25 410 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 NDUFA13Q9P0J0 144 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 SCAF8Q9UPN6 1271 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 SNX13Q9Y5W8 968 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 ZHX2Q9Y6X8 837 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 TUBGCP6Q96RT7 1819 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 PSTPIP1O43586 416 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 ITGA2BP08514 1039 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 PRKG1Q13976 671 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 PRPSAP1Q14558 356 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 CCDC14Q49A88 953 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 FASTKD1Q53R41 847 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 OR52E8Q6IFG1 317 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 NET1Q7Z628 596 aaPredicted RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 SLC26A11Q86WA9 606 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 ZNF786Q8N393 782 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 C7orf31Q8N865 590 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 FBXO27Q8NI29 283 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 AGAP3Q96P47 875 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 PPP1R16BQ96T49 567 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 CDRT15Q96T59 188 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 TIPINQ9BVW5 301 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 DHX35Q9H5Z1 703 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 RMI1Q9H9A7 625 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 LIN28AQ9H9Z2 209 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 GABBR1Q9UBS5 961 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 LGALS13Q9UHV8 139 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 CALB1P05937 261 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 KRT7P08729 469 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 SREBF1P36956 1147 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 RPL5P46777 297 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 ALDH1A3P47895 512 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 MOGSQ13724 837 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 FNBP1LQ5T0N5 605 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 FAM102AQ5T9C2 384 aaPredicted RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 SWSAP1Q6NVH7 229 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 ENDOVQ8N8Q3 282 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 ZFAND2BQ8WV99 257 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 EBF4Q9BQW3 602 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 UNKQ9C0B0 810 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
PALB2-206ENST00000568219 GRID1Q9ULK0 1009 aa11.34□□□□□ -0.59
PALB2-206ENST00000568219 ALOX15BO15296 676 aa11.33□□□□□ -0.6
PALB2-206ENST00000568219 PRPF4O43172 522 aaKnown RBP eCLIP11.33□□□□□ -0.6
PALB2-206ENST00000568219 STRNO43815 780 aa11.33□□□□□ -0.6
PALB2-206ENST00000568219 UQCRBP14927 111 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms