RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 DGKIO75912 1065 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 TNNC2P02585 160 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 AFPP02771 609 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 KRT19P08727 400 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 KCNE1P15382 129 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 ATP2A2P16615 1042 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 MAPK1P28482 360 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 COPB1P53618 953 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 FANCCQ00597 558 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 RNASELQ05823 741 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 BIRC3Q13489 604 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 VWA3BQ502W6 1294 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 MIIPQ5JXC2 388 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 WDR49Q8IV35 697 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 BEST2Q8NFU1 509 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 CACTINQ8WUQ7 758 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 RABGGTAQ92696 567 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 ALKBH8Q96BT7 664 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 FAM193BQ96PV7 902 aaPredicted RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 PPP1R10Q96QC0 940 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 YME1L1Q96TA2 773 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 GDF15Q99988 308 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 MTMR12Q9C0I1 747 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 ACSS3Q9H6R3 686 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 GOLGA2P5Q9HBQ8 144 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 TBC1D13Q9NVG8 400 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 DPP3Q9NY33 737 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 CACNG4Q9UBN1 327 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 TUBGCP4Q9UGJ1 667 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 UBQLN1Q9UMX0 589 aaKnown RBP8.33□□□□□ -1.08
SMG1-214ENST00000568038 DERAQ9Y315 318 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 C2CD2Q9Y426 696 aa8.33□□□□□ -1.08
SMG1-214ENST00000568038 ANK1P16157 1881 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 CASTOR2A6NHX0 329 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 LRRC10BA6NIK2 292 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 PAX4O43316 350 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 XPOTO43592 962 aaKnown RBP8.32□□□□□ -1.08
SMG1-214ENST00000568038 DDHD2O94830 711 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 CLSTN1O94985 981 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 C4BPAP04003 597 aaKnown RBP8.32□□□□□ -1.08
SMG1-214ENST00000568038 GTF2H1P32780 548 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 FMO5P49326 533 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 MXI1P50539 228 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 RABGGTBP53611 331 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 UBASH3AP57075 661 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 MYL7Q01449 175 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 PLCB3Q01970 1234 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 ENPEPQ07075 957 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 GRIK3Q13003 919 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 ZBTB6Q15916 424 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 FILIP1LQ4L180 1135 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 CBWD6Q4V339 395 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 CBWD3Q5JTY5 395 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 CBWD5Q5RIA9 395 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 SPOUT1Q5T280 376 aaKnown RBP8.32□□□□□ -1.08
SMG1-214ENST00000568038 TDRD10Q5VZ19 366 aaKnown RBP8.32□□□□□ -1.08
SMG1-214ENST00000568038 KRT39Q6A163 491 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 ZNF765Q7L2R6 523 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 APTXQ7Z2E3 356 aaKnown RBP8.32□□□□□ -1.08
SMG1-214ENST00000568038 TRAPPC11Q7Z392 1133 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 NT5DC4Q86YG4 428 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 ZNF280BQ86YH2 543 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 HERC6Q8IVU3 1022 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 GATA6Q92908 595 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 ELMO3Q96BJ8 720 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
SMG1-214ENST00000568038 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 SLC9A7Q96T83 725 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 CRACR2AQ9BSW2 395 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 BCO2Q9BYV7 579 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 NDST4Q9H3R1 872 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 TMEM8AQ9HCN3 771 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 SLC38A7Q9NVC3 462 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 IFNKQ9P0W0 207 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 DCTN4Q9UJW0 460 aa8.32□□□□□ -1.08
SMG1-214ENST00000568038 LGALS16A8MUM7 142 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 GRXCR1A8MXD5 290 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 INPPL1O15357 1258 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 TEX33O43247 280 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 AP5Z1O43299 807 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 B4GALT3O60512 393 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 N4BP1O75113 896 aaKnown RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 ZC3H11AO75152 810 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMG1-214ENST00000568038 LRRN2O75325 713 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 GJB5O95377 273 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 VNN1O95497 513 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 CST3P01034 146 aaPredicted RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 HLA-DRAP01903 254 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 ITGB3P05106 788 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 POLR2BP30876 1174 aaKnown RBP8.31□□□□□ -1.08
SMG1-214ENST00000568038 PIK3CAP42336 1068 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 AP3M2P53677 418 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 MYL6P60660 151 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 UBXN1Q04323 297 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 TUSC3Q13454 348 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 TRPC3Q13507 836 aa8.31□□□□□ -1.08
SMG1-214ENST00000568038 BTG3Q14201 252 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms