RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 SLC9A6Q92581 669 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 PBKQ96KB5 322 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 PPP1R9BQ96SB3 815 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 GDF15Q99988 308 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 COLEC11Q9BWP8 271 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 TRIM5Q9C035 493 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 A1L4Q6 167 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 LINC00473A8K010 186 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 RASA4BC9J798 803 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 RAB27BO00194 218 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 RASA4O43374 803 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 RHOBTB3O94955 611 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 VNN1O95497 513 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 LMNAP02545 664 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ANXA2P07355 339 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 PARP1P09874 1014 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 NR2F6P10588 404 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ZFXP17010 805 aaPredicted RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ACVR2AP27037 513 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 STT3AP46977 705 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 PTDSS1P48651 473 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 PDE6CP51160 858 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 CLCN2P51788 898 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ARHGEF7Q14155 803 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 LONRF1Q17RB8 773 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 TREML2Q5T2D2 321 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 DEPDC1Q5TB30 811 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 PLAG1Q6DJT9 500 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 C11orf96Q7Z7L8 435 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 VGLL2Q8N8G2 317 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 FAM98AQ8NCA5 519 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 DNAJB14Q8TBM8 379 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 GLG1Q92896 1179 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ZC3H10Q96K80 434 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ALG8Q9BVK2 526 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 PNPLA8Q9NP80 782 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 EHD3Q9NZN3 535 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 LRIT1Q9P2V4 623 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 MYO1AQ9UBC5 1043 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 ITGB1BP2Q9UKP3 347 aa4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 WDR33Q9C0J8 1336 aaKnown RBP4.72□□□□□ -1.65
HERPUD1-212ENST00000567944 AGPSO00116 658 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 SLC16A3O15427 465 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 C1QL1O75973 258 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 FESP07332 822 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 NBPF7P0C2Y1 421 aaPredicted RBP4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 FGFR2P21802 821 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 TNFSF4P23510 183 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 IL1R2P27930 398 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 CXCR5P32302 372 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 PTH2RP49190 550 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 CPT1AP50416 773 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 ITGA8P53708 1063 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 IFIT5Q13325 482 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 PICALMQ13492 652 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 FHL3Q13643 280 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 SLC29A2Q14542 456 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 KCNAB1Q14722 419 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 INSCQ1MX18 579 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 SYCP2LQ5T4T6 812 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 ZNF618Q5T7W0 954 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 RRAGBQ5VZM2 374 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 HIBCHQ6NVY1 386 aaPredicted RBP4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 DPP9Q86TI2 863 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 SOCS4Q8WXH5 440 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 RIPOR3Q96MK2 946 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 STARD7Q9NQZ5 370 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 HDAC9Q9UKV0 1011 aa4.71□□□□□ -1.66
HERPUD1-212ENST00000567944 CLCA1A8K7I4 914 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 AREL1O15033 823 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 KIAA0355O15063 1070 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 CD3EAPO15446 510 aaKnown RBP4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 TLR5O60602 858 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 SRGAP2O75044 1071 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 FGF18O76093 207 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 HGFP14210 728 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 SERPINB3P29508 390 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 UQCRC1P31930 480 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 PRKAG1P54619 331 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 BCAT1P54687 386 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 AK2P54819 239 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 TIAL1Q01085 375 aaKnown RBP eCLIP4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 BMPR2Q13873 1038 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 UBE4AQ14139 1066 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 FAM209BQ5JX69 171 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 CACHD1Q5VU97 1274 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 SLC9A4Q6AI14 798 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 RNF44Q7L0R7 432 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 YAF2Q8IY57 180 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 OR2C3Q8N628 320 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 OSCP1Q8WVF1 389 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 ATRIPQ8WXE1 791 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 R3HDM4Q96D70 268 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 IQCDQ96DY2 449 aa4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 ZBTB45Q96K62 511 aaPredicted RBP4.7□□□□□ -1.66
HERPUD1-212ENST00000567944 SGCZQ96LD1 299 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms