RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 MTF1Q14872 753 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 ZNF77Q15935 545 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 KNOP1Q1ED39 458 aaKnown RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 ATL3Q6DD88 541 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 FSTL4Q6MZW2 842 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 CC2D1AQ6P1N0 951 aaPredicted RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 PRR23BQ6ZRT6 265 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 C12orf56Q8IXR9 622 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 CEP57L1Q8IYX8 460 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 ARL14EPQ8N8R7 260 aaPredicted RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 KIAA0895Q8NCT3 520 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 OR6B3Q8NGW1 331 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 MYCBPAPQ8TBZ2 947 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 SECISBP2LQ93073 1101 aaKnown RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 ELMO3Q96BJ8 720 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 PAGE5Q96GU1 130 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 SPATA17Q96L03 361 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 SNX25Q9H3E2 840 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 FBRSL1Q9HCM7 1045 aaKnown RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 GCNT4Q9P109 453 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
LYRM1-207ENST00000567165 HELZP42694 1942 aaKnown RBP11.62□□□□□ -0.55
LYRM1-207ENST00000567165 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 CLDN5O00501 218 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 EXOC3O60645 756 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 TACC1O75410 805 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 PAPSS2O95340 614 aaPredicted RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 EGFP01133 1207 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 USP17L7P0C7H9 530 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 PDIA4P13667 645 aaKnown RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 PFKFB1P16118 471 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 ANXA13P27216 316 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 GNL1P36915 607 aaPredicted RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 CACNA2D1P54289 1103 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 FAM160A1Q05DH4 1040 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 GRSF1Q12849 480 aaKnown RBP eCLIP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 STK4Q13043 487 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 TRPC3Q13507 836 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 PDGFRLQ15198 375 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 MAPRE1Q15691 268 aaKnown RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 RSPO4Q2I0M5 234 aaPredicted RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 TMEM196Q5HYL7 178 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 TDRD10Q5VZ19 366 aaKnown RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 VSTM1Q6UX27 236 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 ERMP1Q7Z2K6 904 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 SH3RF2Q8TEC5 729 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 SMYD3Q9H7B4 428 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 PARD6AQ9NPB6 346 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 EXOC1Q9NV70 894 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 TMEM30AQ9NV96 361 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 POLR3BQ9NW08 1133 aaPredicted RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 DUS2Q9NX74 493 aaKnown RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 NXF1Q9UBU9 619 aaKnown RBP11.61□□□□□ -0.55
LYRM1-207ENST00000567165 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 RAB23Q9ULC3 237 aa11.61□□□□□ -0.55
LYRM1-207ENST00000567165 A0A1B0GVL5 298 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 LRRIQ3A6PVS8 624 aaPredicted RBP11.6□□□□□ -0.55
LYRM1-207ENST00000567165 F8VP50 259 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 TRDMT1O14717 391 aaKnown RBP11.6□□□□□ -0.55
LYRM1-207ENST00000567165 TRIM66O15016 1216 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 PHACTR2O75167 634 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 CLSTN1O94985 981 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 PTPN1P18031 435 aaKnown RBP11.6□□□□□ -0.55
LYRM1-207ENST00000567165 TGM1P22735 817 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 RAP1GAPP47736 663 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 PXNP49023 591 aaPredicted RBP11.6□□□□□ -0.55
LYRM1-207ENST00000567165 ZXDBP98169 803 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 FOXK2Q01167 660 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 BIRC3Q13489 604 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 SIM2Q14190 667 aaPredicted RBP11.6□□□□□ -0.55
LYRM1-207ENST00000567165 KCNB1Q14721 858 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 SCARA5Q6ZMJ2 495 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 DENND5BQ6ZUT9 1274 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 DGLUCYQ7Z3D6 616 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 SYNPOQ8N3V7 929 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 FSIP1Q8NA03 581 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 B3GALNT2Q8NCR0 500 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 OSCP1Q8WVF1 389 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 ZNF518BQ9C0D4 1074 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 CGNQ9P2M7 1197 aaKnown RBP11.6□□□□□ -0.55
LYRM1-207ENST00000567165 GMEB2Q9UKD1 530 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 USP18Q9UMW8 372 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 CACNA1AO00555 2505 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 CEP250Q9BV73 2442 aa11.6□□□□□ -0.55
LYRM1-207ENST00000567165 MED19A0JLT2 244 aaPredicted RBP11.59□□□□□ -0.55
LYRM1-207ENST00000567165 A8MXQ7 604 aa11.59□□□□□ -0.55
LYRM1-207ENST00000567165 RNF40O75150 1001 aa11.59□□□□□ -0.55
LYRM1-207ENST00000567165 VNN1O95497 513 aa11.59□□□□□ -0.55
LYRM1-207ENST00000567165 STAU1O95793 577 aaKnown RBP11.59□□□□□ -0.55
LYRM1-207ENST00000567165 HDCP19113 662 aa11.59□□□□□ -0.55
LYRM1-207ENST00000567165 ATICP31939 592 aa11.59□□□□□ -0.55
LYRM1-207ENST00000567165 GJA4P35212 333 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms