RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.55□□□□□ -1.36
KARS-208ENST00000566772 E7EVH7 732 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 CCP110O43303 1012 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 DOK2O60496 412 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 VPS4BO75351 444 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 AMHP03971 560 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 PFKLP17858 780 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 AKT1P31749 480 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 HOXD12P35452 270 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 KRT20P35900 424 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 CDR1P51861 262 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
KARS-208ENST00000566772 TERF1P54274 439 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 NAP1L1P55209 391 aaKnown RBP6.55□□□□□ -1.36
KARS-208ENST00000566772 WNT3P56703 355 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 GRM4Q14833 912 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 MEA1Q16626 185 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 TSTQ16762 297 aaKnown RBP6.55□□□□□ -1.36
KARS-208ENST00000566772 INSCQ1MX18 579 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 ALDH1L2Q3SY69 923 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 VWA3BQ502W6 1294 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 PPP1R32Q7Z5V6 425 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 ANKS1BQ7Z6G8 1248 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 GAS2L3Q86XJ1 694 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 NRSN1Q8IZ57 195 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 CMTM4Q8IZR5 234 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 LSMEM1Q8N8F7 131 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 AGBL5Q8NDL9 886 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 FLAD1Q8NFF5 587 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 RSC1A1Q92681 617 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 C3orf49Q96BT1 292 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 KLHL32Q96NJ5 620 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 MED15Q96RN5 788 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 TREX2Q9BQ50 279 aaPredicted RBP6.55□□□□□ -1.36
KARS-208ENST00000566772 KRTAP4-12Q9BQ66 201 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 BRD8Q9H0E9 1235 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 OR10A2Q9H208 303 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 VPS16Q9H269 839 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 RNPEPQ9H4A4 650 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 ELAC1Q9H777 363 aaKnown RBP6.55□□□□□ -1.36
KARS-208ENST00000566772 ZSCAN32Q9NX65 697 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 SIRT5Q9NXA8 310 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 HPSEQ9Y251 543 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 YEATS2Q9ULM3 1422 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 MYO5CQ9NQX4 1742 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
KARS-208ENST00000566772 ZMYM4Q5VZL5 1548 aa6.55□□□□□ -1.36
KARS-208ENST00000566772 HECW1Q76N89 1606 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 CDHR4A6H8M9 788 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 RRP9O43818 475 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 AHCYL1O43865 530 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 PPP6R2O75170 966 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 ADAMTS4O75173 837 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 CHEK2O96017 543 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 POMCP01189 267 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 SNRPA1P09661 255 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 ZNF888P0CJ79 500 aaPredicted RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
KARS-208ENST00000566772 IGFBP6P24592 240 aaPredicted RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 VIPR2P41587 438 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 DRG2P55039 364 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 CLRN1P58418 232 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 MRPL49Q13405 166 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 BOP1Q14137 746 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 UBXN2BQ14CS0 331 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 TBR1Q16650 682 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 ZNF750Q32MQ0 723 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 FAM133BQ5BKY9 247 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 PRR31Q5SQ13 230 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 AGBL4Q5VU57 503 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 CACHD1Q5VU97 1274 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 RINT1Q6NUQ1 792 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 Q6ZUG5 572 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 RAB11FIP2Q7L804 512 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 CHD1LQ86WJ1 897 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 OR14K1Q8NGZ2 314 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 SMCR8Q8TEV9 937 aaPredicted RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 PWWP2AQ96N64 755 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 GPHA2Q96T91 129 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 REEP2Q9BRK0 252 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 TTYH3Q9C0H2 523 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 LMAN2LQ9H0V9 348 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 NKIRAS2Q9NYR9 191 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 NOL7Q9UMY1 257 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 CNPY2Q9Y2B0 182 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 RRP7AQ9Y3A4 280 aaKnown RBP6.54□□□□□ -1.36
KARS-208ENST00000566772 PREX1Q8TCU6 1659 aa6.54□□□□□ -1.36
KARS-208ENST00000566772 FAM90A18PA6NE21 464 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 FAM90A16PA6NEW6 464 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 AQP7P3A6NL99 342 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 FAM90A9PA6NNJ1 464 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 FAM90A5PA8MXJ8 464 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 DCLK1O15075 740 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 SPTLC2O15270 562 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 PJA2O43164 708 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 PIAS2O75928 621 aa6.53□□□□□ -1.36
KARS-208ENST00000566772 CNPP09543 421 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms