RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PARD6AQ9NPB6 346 aa29.52■■■□□ 2.32
UBFD1-206ENST00000566669 SEMA4GQ9NTN9 838 aa29.52■■■□□ 2.32
UBFD1-206ENST00000566669 CLIC2O15247 247 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 EXOC3O60645 756 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 GALK1P51570 392 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 ATXN1P54253 815 aaKnown RBP29.51■■■□□ 2.31
UBFD1-206ENST00000566669 ARL14EPQ8N8R7 260 aaPredicted RBP29.51■■■□□ 2.31
UBFD1-206ENST00000566669 SH3RF2Q8TEC5 729 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 CD101Q93033 1021 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 SLITRK1Q96PX8 696 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 CYP2S1Q96SQ9 504 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 VRTNQ9H8Y1 702 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 PCDHA7Q9UN72 937 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 ZNF638Q14966 1978 aaKnown RBP29.51■■■□□ 2.31
UBFD1-206ENST00000566669 OBSL1O75147 1896 aa29.51■■■□□ 2.31
UBFD1-206ENST00000566669 HCRTO43612 131 aa29.5■■■□□ 2.31
UBFD1-206ENST00000566669 CST3P01034 146 aaPredicted RBP29.5■■■□□ 2.31
UBFD1-206ENST00000566669 MYL1P05976 194 aa29.5■■■□□ 2.31
UBFD1-206ENST00000566669 PSMD2Q13200 908 aa29.5■■■□□ 2.31
UBFD1-206ENST00000566669 EML3Q32P44 896 aa29.5■■■□□ 2.31
UBFD1-206ENST00000566669 CACNA2D4Q7Z3S7 1137 aa29.5■■■□□ 2.31
UBFD1-206ENST00000566669 SLC22A12Q96S37 553 aa29.5■■■□□ 2.31
UBFD1-206ENST00000566669 ATP8B3O60423 1300 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 MED19A0JLT2 244 aaPredicted RBP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 C2orf78A6NCI8 922 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 SLC9A3R1O14745 358 aaPredicted RBP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 RNF40O75150 1001 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 PHACTR2O75167 634 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 RPP40O75818 363 aaKnown RBP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 SLFN14P0C7P3 912 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 PTPN1P18031 435 aaKnown RBP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 SLC7A9P82251 487 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 CCDC142Q17RM4 750 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 MDH1BQ5I0G3 518 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 TDRD10Q5VZ19 366 aaKnown RBP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 SYT13Q7L8C5 426 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 DDX42Q86XP3 938 aaKnown RBP eCLIP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 PDZD8Q8NEN9 1154 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 RIN3Q8TB24 985 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 CHFRQ96EP1 664 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 MRPL45Q9BRJ2 306 aaKnown RBP29.49■■■□□ 2.31
UBFD1-206ENST00000566669 SLC39A2Q9NP94 309 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 USP25Q9UHP3 1055 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 DNAH14Q0VDD8 3507 aa29.49■■■□□ 2.31
UBFD1-206ENST00000566669 EGFP01133 1207 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 PRR23CQ6ZRP0 262 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 SLC9A9Q8IVB4 645 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 FAM160A2Q8N612 972 aaPredicted RBP29.48■■■□□ 2.31
UBFD1-206ENST00000566669 OVCA2Q8WZ82 227 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 TNIP3Q96KP6 325 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 BLZF1Q9H2G9 400 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 C2orf42Q9NWW7 574 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 WNT6Q9Y6F9 365 aa29.48■■■□□ 2.31
UBFD1-206ENST00000566669 ZNF840PA6NDX5 716 aa29.47■■■□□ 2.31
UBFD1-206ENST00000566669 A8MXQ7 604 aa29.47■■■□□ 2.31
UBFD1-206ENST00000566669 F8VP50 259 aa29.47■■■□□ 2.31
UBFD1-206ENST00000566669 RTN3O95197 1032 aaPredicted RBP29.47■■■□□ 2.31
UBFD1-206ENST00000566669 B3GALNT2Q8NCR0 500 aa29.47■■■□□ 2.31
UBFD1-206ENST00000566669 DDX1Q92499 740 aaKnown RBP29.47■■■□□ 2.31
UBFD1-206ENST00000566669 RCOR1Q9UKL0 485 aa29.47■■■□□ 2.31
UBFD1-206ENST00000566669 PCDHGA5Q9Y5G8 931 aa29.47■■■□□ 2.31
UBFD1-206ENST00000566669 SLC30A4O14863 429 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 CCDC192P0DO97 292 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 P4HA1P13674 534 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 AFMP43652 599 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 CLDN10P78369 228 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 SRSF5Q13243 272 aaKnown RBP29.46■■■□□ 2.31
UBFD1-206ENST00000566669 CUL4BQ13620 913 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 XYLT2Q9H1B5 865 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 EXOC1Q9NV70 894 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 EBF1Q9UH73 591 aa29.46■■■□□ 2.31
UBFD1-206ENST00000566669 NCOR2Q9Y618 2525 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 KIF20AO95235 890 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 OLFM2O95897 454 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 TRIM21P19474 475 aaKnown RBP29.45■■■□□ 2.31
UBFD1-206ENST00000566669 MYL6P60660 151 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 BIRC3Q13489 604 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 FOXD4L5Q5VV16 416 aaPredicted RBP29.45■■■□□ 2.31
UBFD1-206ENST00000566669 TTC16Q8NEE8 873 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 PARD3BQ8TEW8 1205 aa29.45■■■□□ 2.31
UBFD1-206ENST00000566669 FOXD4L4Q8WXT5 416 aaPredicted RBP29.45■■■□□ 2.31
UBFD1-206ENST00000566669 ZC3H10Q96K80 434 aaKnown RBP29.45■■■□□ 2.31
UBFD1-206ENST00000566669 NXF1Q9UBU9 619 aaKnown RBP29.45■■■□□ 2.31
UBFD1-206ENST00000566669 LEFTY2O00292 366 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 APBB3O95704 486 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 USP46P62068 366 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 ZNF667Q5HYK9 610 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 PKN3Q6P5Z2 889 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 C11orf74Q86VG3 221 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 NUP93Q8N1F7 819 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 ZNF516Q92618 1163 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 FBRSL1Q9HCM7 1045 aaKnown RBP29.44■■■□□ 2.3
UBFD1-206ENST00000566669 COMMD8Q9NX08 183 aa29.44■■■□□ 2.3
UBFD1-206ENST00000566669 DYNC1LI1Q9Y6G9 523 aaKnown RBP29.44■■■□□ 2.3
UBFD1-206ENST00000566669 AXIN1O15169 862 aa29.43■■■□□ 2.3
UBFD1-206ENST00000566669 RPN1P04843 607 aaKnown RBP29.43■■■□□ 2.3
UBFD1-206ENST00000566669 RAP1GAPP47736 663 aa29.43■■■□□ 2.3
UBFD1-206ENST00000566669 ZNF699Q32M78 642 aa29.43■■■□□ 2.3
UBFD1-206ENST00000566669 FOXD4L6Q3SYB3 417 aaPredicted RBP29.43■■■□□ 2.3
UBFD1-206ENST00000566669 FOXD4L3Q6VB84 417 aaPredicted RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms