RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 KIAA0319LQ8IZA0 1049 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 JOSD2Q8TAC2 188 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 RNF139Q8WU17 664 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 MYCBPQ99417 103 aaPredicted RBP12.09□□□□□ -0.47
CDH1-210ENST00000566612 BTBD7Q9P203 1132 aa12.09□□□□□ -0.47
CDH1-210ENST00000566612 MYH15Q9Y2K3 1946 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 LIASO43766 372 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 DIAPH2O60879 1101 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 SHOX2O60902 331 aaPredicted RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 PEX5P50542 639 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 CELF3Q5SZQ8 465 aaKnown RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 CDCA5Q96FF9 252 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 TMEM59LQ9UK28 342 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 ZNF541Q9H0D2 1346 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 MYH1P12882 1939 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 H3BRJ5 948 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 NFKBIEO00221 500 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 CFLARO15519 480 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 ATP5HO75947 161 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 CREB1P16220 341 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 ZFXP17010 805 aaPredicted RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 SLC26A2P50443 739 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 BMPR2Q13873 1038 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 SLC39A4Q6P5W5 647 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 C12orf29Q8N999 325 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 SLC7A14Q8TBB6 771 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 NTPCRQ9BSD7 190 aaKnown RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 MANSC1Q9H8J5 431 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 PDE4DIPQ5VU43 2346 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 MROH7Q68CQ1 1323 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 HSPA4LO95757 839 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 MMP8P22894 467 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 ADORA2AP29274 412 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 PTGIRP43119 386 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 EPHB1P54762 984 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 DEUP1Q05D60 604 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 PAN2Q504Q3 1202 aaKnown RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 LONP2Q86WA8 852 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 DTX3LQ8TDB6 740 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 PPP1R36Q96LQ0 422 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 MAGEB18Q96M61 343 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 KIF9Q9HAQ2 790 aa12.08□□□□□ -0.48
CDH1-210ENST00000566612 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
CDH1-210ENST00000566612 GNAT1P11488 350 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 DRD4P21917 467 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 KDELR1P24390 212 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 ALDH18A1P54886 795 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 FSTL1Q12841 308 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 MAP1SQ66K74 1059 aaPredicted RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 CYP4F11Q9HBI6 524 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 NOD2Q9HC29 1040 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 GRHL1Q9NZI5 618 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 ANKRD36CQ5JPF3 1778 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 RAD23BP54727 409 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 DENND5BQ6ZUT9 1274 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 ZCCHC9Q8N567 271 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 GABPB2Q8TAK5 448 aaPredicted RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 LMO3Q8TAP4 145 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 PIK3R5Q8WYR1 880 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 APOBEC2Q9Y235 224 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 COQ4Q9Y3A0 265 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 PPP2R3BQ9Y5P8 575 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 TMEM191CA6NGB0 347 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 LGALS2P05162 132 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 GSTA1P08263 222 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 GSTA2P09210 222 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 PYGBP11216 843 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 ACAT1P24752 427 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 NUMBP49757 651 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 TPI1P60174 286 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 ZNF268Q14587 947 aaPredicted RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 ITIH4Q14624 930 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
CDH1-210ENST00000566612 MRPL42Q9Y6G3 142 aaKnown RBP12.07□□□□□ -0.48
CDH1-210ENST00000566612 M0QYT0 321 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 CXCL11O14625 94 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 PDHA1P08559 390 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 ARID3BQ8IVW6 561 aaPredicted RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 ALKBH8Q96BT7 664 aaKnown RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDH1-210ENST00000566612 SSX2IPQ9Y2D8 614 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
CDH1-210ENST00000566612 GPC4O75487 556 aa12.06□□□□□ -0.48
CDH1-210ENST00000566612 CALRP27797 417 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms