RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ARFIP2P53365 341 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 MMRN1Q13201 1228 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 DPYSL3Q14195 570 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 KBTBD12Q3ZCT8 623 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 ZPBP2Q6X784 338 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 CTAGE3PQ8IX95 158 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PRKCBP05771 671 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 GNAZP19086 355 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 SERPINB3P29508 390 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 MIPP30301 263 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 RFC5P40937 340 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PRKG1Q13976 671 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 RASA2Q15283 850 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 RFWD3Q6PCD5 774 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 APBB1IPQ7Z5R6 666 aaPredicted RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 CEP120Q8N960 986 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 CFAP36Q96G28 342 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 NIFKQ9BYG3 293 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 IQCGQ9H095 443 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 VPS11Q9H270 941 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 SSU72Q9NP77 194 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 IQANK1A0A1B0GTG1 560 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 KBTBD13C9JR72 458 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 UPP2O95045 317 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 ATG7O95352 703 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PDHA1P08559 390 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 BGNP21810 368 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 UBA1P22314 1058 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 GCLCP48506 637 aaPredicted RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 PTDSS1P48651 473 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 OAZ1P54368 228 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 ZNF200P98182 395 aaPredicted RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 FAAP100Q0VG06 881 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 CCDC6Q16204 474 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 CAPRIN2Q6IMN6 1127 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 ANKRD36BP1Q96IX9 119 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 SERAC1Q96JX3 654 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PCYT2Q99447 389 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 ACO2Q99798 780 aaKnown RBP14.89□□□□□ -0.03
CDH1-209ENST00000566510 ARL8BQ9NVJ2 186 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PHIPQ8WWQ0 1821 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 TCRBV9S1A1TA0A576 114 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 H7C0C1 242 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 GYG2O15488 501 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 MED7O43513 233 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 FAM189A1O60320 539 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 LUC7L3O95232 432 aaKnown RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 ERBB2P04626 1255 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 ATP5OP48047 213 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 EFNA5P52803 228 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 CDO1Q16878 200 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 C1orf228Q6PIY5 440 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 MZB1Q8WU39 189 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 MCUR1Q96AQ8 359 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 ALKBH8Q96BT7 664 aaKnown RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 NLRP4Q96MN2 994 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 MIPEPQ99797 713 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 STK32BQ9NY57 414 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 USP18Q9UMW8 372 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 PARP14Q460N5 1801 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 INO80B-WBP1J3KQ70 363 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 APOC4-APOC2K7ER74 178 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 CCDC22O60826 627 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 FAM155BO75949 473 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 MAP3K6O95382 1288 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 ITGBL1O95965 494 aaPredicted RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 APOC2P02655 101 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 GJB1P08034 283 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 CDH5P33151 784 aaPredicted RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 CDH6P55285 790 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 ROR1Q01973 937 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 LAMTOR4Q0VGL1 99 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 DCAF15Q66K64 600 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 ZBTB8OSQ8IWT0 167 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 MICALL2Q8IY33 904 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 VPS52Q8N1B4 723 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 ZNF276Q8N554 614 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 FAF2Q96CS3 445 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 PRR11Q96HE9 360 aaPredicted RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 FAXDC2Q96IV6 333 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 TMEM120AQ9BXJ8 343 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 OSBPL1AQ9BXW6 950 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 INO80BQ9C086 356 aaPredicted RBP14.88□□□□□ -0.03
CDH1-209ENST00000566510 SAR1AQ9NR31 198 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDH1-209ENST00000566510 FETUBQ9UGM5 382 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 EFR3BQ9Y2G0 817 aa14.88□□□□□ -0.03
CDH1-209ENST00000566510 GRAP2O75791 330 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 KCNA3P22001 575 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 GCKP35557 465 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 PEX19P40855 299 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 ABL2P42684 1182 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 CCNG1P51959 295 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 CTC1Q2NKJ3 1217 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 MUM1Q2TAK8 710 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms