RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SAMD1Q6SPF0 538 aaPredicted RBP22.58■■□□□ 1.2
SPSB3-208ENST00000566339 LRRC74BQ6ZQY2 392 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 TMPRSS6Q8IU80 811 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 RTKN2Q8IZC4 609 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 CPXCR1Q8N123 301 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 ELMO3Q96BJ8 720 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 TSC22D3Q99576 134 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 NIF3L1Q9GZT8 377 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 VPS33BQ9H267 617 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 JPH1Q9HDC5 661 aaPredicted RBP22.58■■□□□ 1.2
SPSB3-208ENST00000566339 SLC9A2Q9UBY0 812 aa22.58■■□□□ 1.2
SPSB3-208ENST00000566339 ZNF541Q9H0D2 1346 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 MAGEA13PA6NCF6 341 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 K7ERI5 159 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 TCF4P15884 667 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 KDELR1P24390 212 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 ARL2P36404 184 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 ACOT2P49753 483 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 OAZ1P54368 228 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 KPNB1Q14974 876 aaKnown RBP22.57■■□□□ 1.2
SPSB3-208ENST00000566339 SWSAP1Q6NVH7 229 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 AGBL3Q8NEM8 1001 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 CCDC110Q8TBZ0 833 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 NR1H4Q96RI1 486 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-208ENST00000566339 SIKE1Q9BRV8 207 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 FAM192AQ9GZU8 254 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 NMRK2Q9NPI5 230 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 SORCS3Q9UPU3 1222 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 PPME1Q9Y570 386 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 SSC5DA1L4H1 1573 aa22.57■■□□□ 1.2
SPSB3-208ENST00000566339 CFAP69A5D8W1 941 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 CHADO15335 359 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 RAD17O75943 681 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 INHBAP08476 426 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 WNT7BP56706 349 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 PTK7Q13308 1070 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 RCN1Q15293 331 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 ACSBG2Q5FVE4 666 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 ATG16L1Q676U5 607 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 TMEM154Q6P9G4 183 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 SLC30A9Q6PML9 568 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 SESTD1Q86VW0 696 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 SMC1BQ8NDV3 1235 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 OXNAD1Q96HP4 312 aaPredicted RBP22.56■■□□□ 1.2
SPSB3-208ENST00000566339 DHX33Q9H6R0 707 aaKnown RBP22.56■■□□□ 1.2
SPSB3-208ENST00000566339 TAS2R1Q9NYW7 299 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 PDP2Q9P2J9 529 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 SLC17A7Q9P2U7 560 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 XPO7Q9UIA9 1087 aaKnown RBP22.56■■□□□ 1.2
SPSB3-208ENST00000566339 DCTN4Q9UJW0 460 aa22.56■■□□□ 1.2
SPSB3-208ENST00000566339 A0A0G2JND7 137 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 TRDMT1O14717 391 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 MED7O43513 233 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 CST8O60676 142 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 SUPT20HL2P0C7V6 817 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 SP100P23497 879 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 PSMA2P25787 234 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 RFC5P40937 340 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 SUPT20HL1Q3ZLR7 823 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 DNAL1Q4LDG9 190 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 MSS51Q4VC12 460 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 C6orf163Q5TEZ5 329 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 TTC39BQ5VTQ0 682 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 ANKRD22Q5VYY1 191 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 DSTYKQ6XUX3 929 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 CAPN12Q6ZSI9 719 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 NET1Q7Z628 596 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 CMASQ8NFW8 434 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 NSUN6Q8TEA1 469 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 WDR83Q9BRX9 315 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 YIPF3Q9GZM5 350 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 DDX43Q9NXZ2 648 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 H0Y3Z8 333 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 MCF2LO15068 1137 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 MAP3K7O43318 606 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 SERPINB3P29508 390 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 ROR2Q01974 943 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 RBBP5Q15291 538 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 TRMT5Q32P41 509 aaKnown RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 HP1BP3Q5SSJ5 553 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-208ENST00000566339 SLC26A11Q86WA9 606 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 HAPLN2Q9GZV7 340 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 RSAD1Q9HA92 442 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 GPAMQ9HCL2 828 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 TEX264Q9Y6I9 313 aa22.55■■□□□ 1.2
SPSB3-208ENST00000566339 CCNFP41002 786 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 SERPINB4P48594 390 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 SOX10P56693 466 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 ACTR2P61160 394 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 DPYSL3Q14195 570 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 EFTUD2Q15029 972 aaKnown RBP eCLIP22.54■■□□□ 1.28e-9■■■■□ 20.6
SPSB3-208ENST00000566339 BBS9Q3SYG4 887 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 GNPTABQ3T906 1256 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 RFWD3Q6PCD5 774 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 C4orf22Q6V702 233 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 SCG3Q8WXD2 468 aaKnown RBP22.54■■□□□ 1.2
SPSB3-208ENST00000566339 MTBPQ96DY7 904 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 IFT43Q96FT9 208 aa22.54■■□□□ 1.2
SPSB3-208ENST00000566339 SYT15Q9BQS2 421 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms