RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 DRG2P55039 364 aaKnown RBP17.71■□□□□ 0.43
RAB40C-210ENST00000566290 SNX16P57768 344 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 SV2CQ496J9 727 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 MRPL10Q7Z7H8 261 aaKnown RBP17.71■□□□□ 0.43
RAB40C-210ENST00000566290 SLC13A5Q86YT5 568 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-210ENST00000566290 EXD1Q8NHP7 514 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 MCRS1Q96EZ8 462 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
RAB40C-210ENST00000566290 KRT12Q99456 494 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 HOMER3Q9NSC5 361 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 LMCD1Q9NZU5 365 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 PADI3Q9ULW8 664 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 USP34Q70CQ2 3546 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 ENPP3O14638 875 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 INPPL1O15357 1258 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 RAD51CO43502 376 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 DCXO43602 365 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 EFCAB14O75071 495 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 RPS6KA5O75582 802 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 SEC31AO94979 1220 aaKnown RBP17.7■□□□□ 0.42
RAB40C-210ENST00000566290 UPP2O95045 317 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 CALCAP01258 141 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 AMHP03971 560 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 CD19P15391 556 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 GPD2P43304 727 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 AARSP49588 968 aaKnown RBP eCLIP17.7■□□□□ 0.423e-8■■■■■ 29.1
RAB40C-210ENST00000566290 DNA2P51530 1060 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 NDST1P52848 882 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 COPS2P61201 443 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 PTPN20Q4JDL3 420 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 PKDCCQ504Y2 493 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 PTCRAQ6ISU1 281 aaPredicted RBP17.7■□□□□ 0.42
RAB40C-210ENST00000566290 PASD1Q8IV76 773 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 CRYBG2Q8N1P7 616 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 TOP6BLQ8N6T0 577 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 APBB2Q92870 758 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 PPP1R10Q96QC0 940 aaKnown RBP17.7■□□□□ 0.42
RAB40C-210ENST00000566290 TWNKQ96RR1 684 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 ZBED2Q9BTP6 218 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 RAB17Q9H0T7 212 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 ERVK-5Q9HDB9 667 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 GIT1Q9Y2X7 761 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 ZDBF2Q9HCK1 2354 aa17.7■□□□□ 0.42
RAB40C-210ENST00000566290 GRXCR2A6NFK2 248 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 SASH3O75995 380 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 GLI1P08151 1106 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 SKIP12755 728 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 RAP1GAPP47736 663 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 MARCKSL1P49006 195 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 RPL34P49207 117 aaKnown RBP17.69■□□□□ 0.42
RAB40C-210ENST00000566290 TAF6P49848 677 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 CDH8P55286 799 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 FAM193AP78312 1265 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 GPS2Q13227 327 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 CASP8Q14790 479 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 DENND1BQ6P3S1 775 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 HFE2Q6ZVN8 426 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 ZDHHC17Q8IUH5 632 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 IPO4Q8TEX9 1081 aaKnown RBP17.69■□□□□ 0.42
RAB40C-210ENST00000566290 HDAC7Q8WUI4 952 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 C18orf8Q96DM3 657 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 NCAPGQ9BPX3 1015 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 FAM114A2Q9NRY5 505 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 FAM105AQ9NUU6 356 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 EFR3BQ9Y2G0 817 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 TRIP11Q15643 1979 aa17.69■□□□□ 0.42
RAB40C-210ENST00000566290 PODXLO00592 558 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 MGEA5O60502 916 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 MICAL2O94851 1124 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 PYGMP11217 842 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 WARSP23381 471 aaKnown RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 CETN2P41208 172 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 PDCLQ13371 301 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 DSC3Q14574 896 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 SIX1Q15475 284 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 ZNF394Q53GI3 561 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 SPDYCQ5MJ68 293 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 TWF2Q6IBS0 349 aaKnown RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 SYDE1Q6ZW31 735 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 ARCQ7LC44 396 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 RBM41Q96IZ5 413 aaKnown RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 RAD9AQ99638 391 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 UBN1Q9NPG3 1134 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 MED4Q9NPJ6 270 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 DDX56Q9NY93 547 aaKnown RBP17.68■□□□□ 0.42
RAB40C-210ENST00000566290 HMGXB4Q9UGU5 601 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 RASAL2Q9UJF2 1139 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 ST3GAL5Q9UNP4 418 aa17.68■□□□□ 0.42
RAB40C-210ENST00000566290 TMEM110-MUSTN1A8MSY1 372 aa17.67■□□□□ 0.42
RAB40C-210ENST00000566290 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
RAB40C-210ENST00000566290 PTGESO14684 152 aa17.67■□□□□ 0.42
RAB40C-210ENST00000566290 MYBL2P10244 700 aa17.67■□□□□ 0.42
RAB40C-210ENST00000566290 PLA2G4AP47712 749 aa17.67■□□□□ 0.42
RAB40C-210ENST00000566290 GUCY2FP51841 1108 aa17.67■□□□□ 0.42
RAB40C-210ENST00000566290 HTRA4P83105 476 aaPredicted RBP17.67■□□□□ 0.42
RAB40C-210ENST00000566290 ZNF252P-AS1Q0IIN9 211 aa17.67■□□□□ 0.42
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