RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 NT5C3AQ9H0P0 336 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 POLR3FQ9H1D9 316 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 CXCL16Q9H2A7 254 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 AKTIPQ9H8T0 292 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 IFT122Q9HBG6 1241 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 PRMT8Q9NR22 394 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RBM12Q9NTZ6 932 aaKnown RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 POLR3BQ9NW08 1133 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 MAPK8IP1Q9UQF2 711 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 GDAQ9Y2T3 454 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 SMIM35A0A1B0GVV1 85 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 ANKRD63C9JTQ0 380 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 F8W810 466 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 SLC16A4O15374 487 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 TEX28O15482 410 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 B4GALT5O43286 388 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 GAS2O43903 313 aaKnown RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 DDHD2O94830 711 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 IDEP14735 1019 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 ZSCAN20P17040 1043 aaPredicted RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 MUTP22033 750 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 GUCY2CP25092 1073 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 BRD2P25440 801 aaKnown RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 NPTX2P47972 431 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 SLC26A2P50443 739 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 POLGP54098 1239 aaPredicted RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 PEX3P56589 373 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 PRKCQQ04759 706 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 CAPSQ13938 189 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 GRM2Q14416 872 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 UAP1L1Q3KQV9 507 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 NT5DC1Q5TFE4 455 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 HAUS3Q68CZ6 603 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 ALG1LQ6GMV1 187 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 CAVIN1Q6NZI2 390 aaKnown RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 C15orf39Q6ZRI6 1047 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 KBTBD6Q86V97 674 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 PPFIBP1Q86W92 1011 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 SFR1Q86XK3 245 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 MYCT1Q8N699 235 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 SPATA20Q8TB22 786 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 RABGGTAQ92696 567 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 MCRS1Q96EZ8 462 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 STRA6Q9BX79 667 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 EMILIN2Q9BXX0 1053 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 CLSTN2Q9H4D0 955 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 ZHX3Q9H4I2 956 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 PIF1Q9H611 641 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 ELAC1Q9H777 363 aaKnown RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 SLC39A2Q9NP94 309 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 PANK4Q9NVE7 773 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 MAN1B1Q9UKM7 699 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 AKT3Q9Y243 479 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 SMG1Q96Q15 3661 aaKnown RBP6.7□□□□□ -1.34
UBFD1-204ENST00000565634 APC2O95996 2303 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 CELSR3Q9NYQ7 3312 aa6.7□□□□□ -1.34
UBFD1-204ENST00000565634 PTPRBP23467 1997 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 CCDC169A6NNP5 214 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 EIF1AYO14602 144 aaKnown RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 CCL16O15467 120 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 MAGEB2O15479 319 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 MEFVO15553 781 aaPredicted RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 LRP3O75074 770 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 PRPF6O94906 941 aaKnown RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 RPN1P04843 607 aaKnown RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF806P0C7X5 589 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 CXCL12P48061 93 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 GPC3P51654 580 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF131P52739 623 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ASIC1P78348 528 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 RNASELQ05823 741 aaKnown RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 POSTNQ15063 836 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 EEF1DP3Q658K8 133 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 SLC39A4Q6P5W5 647 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF720Q7Z2F6 126 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 NME8Q8N427 588 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 KIAA0895Q8NCT3 520 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 TMEM161BQ8NDZ6 487 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 DEFB124Q8NES8 71 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 NXPE3Q969Y0 559 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 BORCS6Q96GS4 357 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 CPB2Q96IY4 423 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 FAM84AQ96KN4 292 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 FAM167AQ96KS9 214 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 NLRP4Q96MN2 994 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 MRPL17Q9NRX2 175 aaKnown RBP6.69□□□□□ -1.34
UBFD1-204ENST00000565634 TBC1D13Q9NVG8 400 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 HCFC1R1Q9NWW0 138 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ANKFY1Q9P2R3 1169 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 ITPR1Q14643 2758 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 CEP192Q8TEP8 1941 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 LAMA5O15230 3695 aa6.69□□□□□ -1.34
UBFD1-204ENST00000565634 KDM3AQ9Y4C1 1321 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms