RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 C2orf42Q9NWW7 574 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ZNF638Q14966 1978 aaKnown RBP16.69■□□□□ 0.26
CDH3-204ENST00000565453 OTOGLQ3ZCN5 2332 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 A8MXQ7 604 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 F8VP50 259 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 K7ESF4 209 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 ANXA13P27216 316 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 CDH8P55286 799 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 NCOA4Q13772 614 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 PDGFRLQ15198 375 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 NFIL3Q16649 462 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 ZACNQ401N2 412 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 FSTL4Q6MZW2 842 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 SYNPOQ8N3V7 929 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 DCLK2Q8N568 766 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 ELOVL4Q9GZR5 314 aa16.69■□□□□ 0.26
CDH3-204ENST00000565453 CLDN5O00501 218 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 TRDMT1O14717 391 aaKnown RBP16.68■□□□□ 0.26
CDH3-204ENST00000565453 MAPK13O15264 365 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
CDH3-204ENST00000565453 CKMP06732 381 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 PFKLP17858 780 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 RAP1GAPP47736 663 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 NRLP54845 237 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 ZXDBP98169 803 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 DMWDQ09019 674 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 PPP2R5DQ14738 602 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 ZNF667Q5HYK9 610 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
CDH3-204ENST00000565453 PAQR9Q6ZVX9 377 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 OSCP1Q8WVF1 389 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
CDH3-204ENST00000565453 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
CDH3-204ENST00000565453 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
CDH3-204ENST00000565453 ZNF840PA6NDX5 716 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 ZNF202O95125 648 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 OLFM2O95897 454 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 HDCP19113 662 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 GJA4P35212 333 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 KCNB1Q14721 858 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 EML3Q32P44 896 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 CEP135Q66GS9 1140 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 PKN3Q6P5Z2 889 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 SCARA5Q6ZMJ2 495 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 GUF1Q8N442 669 aaKnown RBP16.67■□□□□ 0.26
CDH3-204ENST00000565453 SH3RF2Q8TEC5 729 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 ECT2Q9H8V3 914 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 FBRSL1Q9HCM7 1045 aaKnown RBP16.67■□□□□ 0.26
CDH3-204ENST00000565453 DUS2Q9NX74 493 aaKnown RBP16.67■□□□□ 0.26
CDH3-204ENST00000565453 EHD2Q9NZN4 543 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 TRPM5Q9NZQ8 1165 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 WNT6Q9Y6F9 365 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 CFAP54Q96N23 3096 aa16.67■□□□□ 0.26
CDH3-204ENST00000565453 EP300Q09472 2414 aaPredicted RBP16.67■□□□□ 0.26
CDH3-204ENST00000565453 IKBKBO14920 756 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 AKAP3O75969 853 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 KIF20AO95235 890 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 ASS1P00966 412 aaKnown RBP16.66■□□□□ 0.26
CDH3-204ENST00000565453 HOXC13P31276 330 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 PPP3CCP48454 512 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
CDH3-204ENST00000565453 SGSM1Q2NKQ1 1148 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 ZCWPW2Q504Y3 356 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 NAIF1Q69YI7 327 aaPredicted RBP16.66■□□□□ 0.26
CDH3-204ENST00000565453 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 TAF4BQ92750 862 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 CCDC47Q96A33 483 aaKnown RBP16.66■□□□□ 0.26
CDH3-204ENST00000565453 RNF38Q9H0F5 515 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 FRMD4BQ9Y2L6 1034 aa16.66■□□□□ 0.26
CDH3-204ENST00000565453 CHURC1-FNTBB4DL54 471 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 TNFRSF10BO14763 440 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 OAS1P00973 400 aaKnown RBP16.65■□□□□ 0.26
CDH3-204ENST00000565453 EGFP01133 1207 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 NR2F2P24468 414 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 HOXA6P31267 233 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 ASPAP45381 313 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 ID4P47928 161 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 IFNAR2P48551 515 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 FNTBP49356 437 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 PDE6CP51160 858 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 GALK1P51570 392 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 VAMP7P51809 220 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 SLC7A9P82251 487 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 GRSF1Q12849 480 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDH3-204ENST00000565453 TAF10Q12962 218 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 SPOPLQ6IQ16 392 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 FUKQ8N0W3 1084 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 CPA6Q8N4T0 437 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 TNIP3Q96KP6 325 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 KCNK16Q96T55 309 aa16.65■□□□□ 0.26
CDH3-204ENST00000565453 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms