RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 CYLDQ9NQC7 956 aa11.85□□□□□ -0.51
SNX29-204ENST00000564791 TMEM30AQ9NV96 361 aa11.85□□□□□ -0.51
SNX29-204ENST00000564791 SMARCAL1Q9NZC9 954 aa11.85□□□□□ -0.51
SNX29-204ENST00000564791 EHD2Q9NZN4 543 aa11.85□□□□□ -0.51
SNX29-204ENST00000564791 IP6K2Q9UHH9 426 aa11.85□□□□□ -0.51
SNX29-204ENST00000564791 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CES2O00748 559 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 TADA3O75528 432 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CAPN15O75808 1086 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 UQCRHP07919 91 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 OR4Q2P0C623 313 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 LCP1P13796 627 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CTNNA2P26232 953 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 MAN1A1P33908 653 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 SLC1A1P43005 524 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 ACADSBP45954 432 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 ALDH7A1P49419 539 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 EPHB4P54760 987 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 SNX16P57768 344 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 SLC6A3Q01959 620 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CKAP4Q07065 602 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 MRPL58Q14197 206 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 MAPRE1Q15691 268 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 SPOUT1Q5T280 376 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 DCAF12L1Q5VU92 463 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 SCUBE3Q8IX30 993 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
SNX29-204ENST00000564791 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 ZMIZ2Q8NF64 920 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 CLEC4CQ8WTT0 213 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 SMARCD1Q96GM5 515 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 PBKQ96KB5 322 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 USTQ9Y2C2 406 aa11.84□□□□□ -0.51
SNX29-204ENST00000564791 GRAP2O75791 330 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 FGBP02675 491 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 SYN1P17600 705 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 BDNFP23560 247 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 PSMA2P25787 234 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 PEX5P50542 639 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 TERF1P54274 439 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 RNASE9P60153 205 aaKnown RBP11.83□□□□□ -0.52
SNX29-204ENST00000564791 ADIGQ0VDE8 80 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 BTG3Q14201 252 aaPredicted RBP11.83□□□□□ -0.52
SNX29-204ENST00000564791 TAF5Q15542 800 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 CTXN3Q4LDR2 81 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 SLC39A12Q504Y0 691 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 RTP2Q5QGT7 225 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 ZNF280DQ6N043 979 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 TRNP1Q6NT89 227 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 ZDHHC17Q8IUH5 632 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 NIPA2Q8N8Q9 360 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.83□□□□□ -0.52
SNX29-204ENST00000564791 KCTD13Q8WZ19 329 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 IGSF21Q96ID5 467 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 KCNK16Q96T55 309 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 VN1R3Q9BXE9 311 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 TMEM59LQ9UK28 342 aa11.83□□□□□ -0.52
SNX29-204ENST00000564791 MRPL42Q9Y6G3 142 aaKnown RBP11.83□□□□□ -0.52
SNX29-204ENST00000564791 CCDC66A2RUB6 948 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CTAGE15A4D2H0 777 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 F8VP50 259 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CTIFO43310 598 aaKnown RBP11.82□□□□□ -0.52
SNX29-204ENST00000564791 CEP104O60308 925 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 EFEMP2O95967 443 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CTAGE8P0CG41 777 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.52
SNX29-204ENST00000564791 FLT3P36888 993 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 TAS2R40P59535 323 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 PIGHQ14442 188 aaPredicted RBP11.82□□□□□ -0.52
SNX29-204ENST00000564791 TMEM240Q5SV17 173 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CCDC181Q5TID7 509 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 C4orf50Q6ZRC1 276 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 GPRIN1Q7Z2K8 1008 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CTAGE6Q86UF2 777 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CTAGE4Q8IX94 777 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 DCP1BQ8IZD4 617 aaKnown RBP11.82□□□□□ -0.52
SNX29-204ENST00000564791 FNIP1Q8TF40 1166 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
SNX29-204ENST00000564791 ZNF558Q96NG5 402 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 YME1L1Q96TA2 773 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.82□□□□□ -0.526e-6■■□□□ 11.7
SNX29-204ENST00000564791 TTPALQ9BTX7 342 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 CSNK1G1Q9HCP0 422 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.82□□□□□ -0.52
SNX29-204ENST00000564791 PCDHA3Q9Y5H8 950 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 V9GYY5 206 aaPredicted RBP11.82□□□□□ -0.52
SNX29-204ENST00000564791 MYO16Q9Y6X6 1858 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 OR6C75A6NL08 312 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 C2CD4BA6NLJ0 364 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 HHLA1C9JL84 531 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 TCF4P15884 667 aa11.82□□□□□ -0.52
SNX29-204ENST00000564791 LAG3P18627 525 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms