RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CGB1A6NKQ9 187 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 NHLRC4P0CG21 123 aaPredicted RBP5.94□□□□□ -1.46
UBR1-205ENST00000564540 CYP4F2P78329 520 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 SLC44A4Q53GD3 710 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 RNF220Q5VTB9 566 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 ZKSCAN2Q63HK3 967 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 CEP85Q6P2H3 762 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 NAPRTQ6XQN6 538 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 ABRAQ8N0Z2 381 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 SOCS4Q8WXH5 440 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 SUCLG2Q96I99 432 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 A1CFQ9NQ94 594 aaKnown RBP5.94□□□□□ -1.46
UBR1-205ENST00000564540 CCNL1Q9UK58 526 aaPredicted RBP5.94□□□□□ -1.46
UBR1-205ENST00000564540 ADAMTS5Q9UNA0 930 aa5.94□□□□□ -1.46
UBR1-205ENST00000564540 TRIM43BA6NCK2 446 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 TPP1O14773 563 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 FRS3O43559 492 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 PRKCGP05129 697 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 ZKSCAN1P17029 563 aaPredicted RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 CTGFP29279 349 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 SRSF4Q08170 494 aaKnown RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 CNGA2Q16280 664 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 KIAA0753Q2KHM9 967 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 SLC9A4Q6AI14 798 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 SUMO4Q6EEV6 95 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 ZNF782Q6ZMW2 699 aaPredicted RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 DPY19L3Q6ZPD9 716 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 Q6ZWC4 215 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 PARS2Q7L3T8 475 aaKnown RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 PTF1AQ7RTS3 328 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 KCTD20Q7Z5Y7 419 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 CAND1Q86VP6 1230 aaKnown RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 SRRM1Q8IYB3 904 aaKnown RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 IZUMO1Q8IYV9 350 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 TTC8Q8TAM2 541 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 LRTOMTQ8WZ04 291 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 TRIM43Q96BQ3 446 aaPredicted RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 FSD1LQ9BXM9 530 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 ZSCAN32Q9NX65 697 aa5.93□□□□□ -1.46
UBR1-205ENST00000564540 FNDC1Q4ZHG4 1894 aaPredicted RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 FRMPD2Q68DX3 1309 aaPredicted RBP5.93□□□□□ -1.46
UBR1-205ENST00000564540 GOLGA6CA6NDK9 693 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 GOLGA6BA6NDN3 693 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 LINC01548A6NM66 108 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 ISM1B1AKI9 464 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 PYCARD-AS1I3L0S3 204 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 SMIM22K7EJ46 135 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 JTBO76095 146 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 PDE8BO95263 885 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 GOLGA6DP0CG33 693 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 CACNB3P54284 484 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 TPTEP56180 551 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 FMO1Q01740 532 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 GALEQ14376 348 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 GBX1Q14549 363 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 GFOD2Q3B7J2 385 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 CHST15Q7LFX5 561 aaPredicted RBP5.92□□□□□ -1.46
UBR1-205ENST00000564540 ZNF804AQ7Z570 1209 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 RP9Q8TA86 221 aaKnown RBP5.92□□□□□ -1.46
UBR1-205ENST00000564540 DNAJB14Q8TBM8 379 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 SPSB4Q96A44 273 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 C17orf80Q9BSJ5 609 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 STK31Q9BXU1 1019 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 TRMT13Q9NUP7 481 aaKnown RBP5.92□□□□□ -1.46
UBR1-205ENST00000564540 OBP2AQ9NY56 170 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 GOLGA6AQ9NYA3 693 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 AFF4Q9UHB7 1163 aaKnown RBP5.92□□□□□ -1.46
UBR1-205ENST00000564540 CDY1Q9Y6F8 540 aa5.92□□□□□ -1.46
UBR1-205ENST00000564540 FER1L4A9Z1Z3 1794 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 H7C4K7 107 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 RASSF9O75901 435 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 ZBED1O96006 694 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 NPSP0C0P6 89 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 MYF5P13349 255 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 ABCG1P45844 678 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 RPS16P62249 146 aaKnown RBP5.91□□□□□ -1.46
UBR1-205ENST00000564540 CYP1B1Q16678 543 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 PROSER3Q2NL68 480 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 DARS2Q6PI48 645 aaKnown RBP5.91□□□□□ -1.46
UBR1-205ENST00000564540 SRGAP1Q7Z6B7 1085 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 WDR75Q8IWA0 830 aaKnown RBP5.91□□□□□ -1.46
UBR1-205ENST00000564540 SEMA6DQ8NFY4 1073 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 NMD3Q96D46 503 aaKnown RBP5.91□□□□□ -1.46
UBR1-205ENST00000564540 LENG8Q96PV6 779 aaPredicted RBP5.91□□□□□ -1.46
UBR1-205ENST00000564540 COL20A1Q9P218 1284 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 GABRQQ9UN88 632 aa5.91□□□□□ -1.46
UBR1-205ENST00000564540 MBD3L4A6NDZ8 208 aaPredicted RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 MBD3L3A6NE82 208 aaPredicted RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 TISP43B9A030 160 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 AP4M1O00189 453 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 GOLIM4O00461 696 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 SRGAP2O75044 1071 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 RASAL1O95294 804 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 MAP4K4O95819 1239 aaPredicted RBP5.9□□□□□ -1.46
UBR1-205ENST00000564540 HRGP04196 525 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 ATF3P18847 181 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 KLRC1P26715 233 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 PEX2P28328 305 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 ITGA8P53708 1063 aa5.9□□□□□ -1.46
UBR1-205ENST00000564540 E2F1Q01094 437 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms