RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 PEAR1Q5VY43 1037 aaPredicted RBP7.87□□□□□ -1.15
VPS4A-203ENST00000564399 SLC36A4Q6YBV0 504 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 CCNI2Q6ZMN8 369 aaPredicted RBP7.87□□□□□ -1.15
VPS4A-203ENST00000564399 SFTPA1Q8IWL2 248 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 RGL4Q8IZJ4 473 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 C4orf32Q8N8J7 132 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 IGSF22Q8N9C0 903 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 LRRC15Q8TF66 581 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 TRMT2BQ96GJ1 504 aaKnown RBP7.87□□□□□ -1.15
VPS4A-203ENST00000564399 C8orf76Q96K31 380 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 MYRFLQ96LU7 910 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 PLIN2Q99541 437 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 ARHGEF4Q9NR80 690 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 GCNT4Q9P109 453 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 CPSF3Q9UKF6 684 aaKnown RBP7.87□□□□□ -1.15
VPS4A-203ENST00000564399 ARHGAP26Q9UNA1 814 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 DERAQ9Y315 318 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 BPTFQ12830 3046 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 PTPRQQ9UMZ3 2332 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 A0A0B4J269 797 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 NPHP3-ACAD11A0A0J9YXS1 232 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 K7ENM7 598 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 LEFTY2O00292 366 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 SLC9A3R1O14745 358 aaPredicted RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 FAM189A1O60320 539 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 TCF3P15923 654 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ACAT1P24752 427 aaKnown RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 TRAPPC10P48553 1259 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ACOT2P49753 483 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 NCKAP1LP55160 1127 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ATP2C1P98194 919 aaPredicted RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 MYL7Q01449 175 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 C19orf57Q0VDD7 668 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 RESTQ13127 1097 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 SLC14A1Q13336 389 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 DHCR24Q15392 516 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 GAB4Q2WGN9 574 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 PLEKHG6Q3KR16 790 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 FILIP1Q7Z7B0 1213 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 SPATA2LQ8IUW3 424 aaPredicted RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 NAXDQ8IW45 347 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ADAM32Q8TC27 787 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 CDK5RAP3Q96JB5 506 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ZNF560Q96MR9 790 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 PNMA5Q96PV4 448 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 FOXP1Q9H334 677 aaPredicted RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ASB7Q9H672 318 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 ABCB6Q9NP58 842 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 SCUBE2Q9NQ36 999 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 DNAAF2Q9NVR5 837 aaKnown RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 DDX43Q9NXZ2 648 aaKnown RBP7.86□□□□□ -1.15
VPS4A-203ENST00000564399 GTF3C4Q9UKN8 822 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 C2CD2Q9Y426 696 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 FREM2Q5SZK8 3169 aa7.86□□□□□ -1.15
VPS4A-203ENST00000564399 MYO18BQ8IUG5 2567 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 MYH10P35580 1976 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 A0A1W2PQD8 194 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 TBC1D3BA6NDS4 549 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 HUS1O60921 280 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ADAM23O75077 832 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 NDUFS2O75306 463 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 FAM13AO94988 1023 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ADH1CP00326 375 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ABL1P00519 1130 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 PLA2G4BP0C869 781 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 GRIA2P42262 883 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 TNFRSF4P43489 277 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 KIR2DL1P43626 348 aaPredicted RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 CYP4F3Q08477 520 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 MESP2Q0VG99 397 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 INTS6LQ5JSJ4 861 aaKnown RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ADALQ6DHV7 355 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 DTHD1Q6ZMT9 781 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 TOGARAM2Q6ZUX3 1019 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ADGRG2Q8IZP9 1017 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 PDCL2Q8N4E4 241 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 MYCT1Q8N699 235 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ZNF513Q8N8E2 541 aaPredicted RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 SYT2Q8N9I0 419 aaPredicted RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 TRIML1Q8N9V2 468 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 SETD7Q8WTS6 366 aaKnown RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 LEO1Q8WVC0 666 aaPredicted RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ERLEC1Q96DZ1 483 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 HSPA12BQ96MM6 686 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ACBD6Q9BR61 282 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 MMTAG2Q9BU76 263 aaKnown RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 ZHX3Q9H4I2 956 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 FAM124BQ9H5Z6 455 aaPredicted RBP7.85□□□□□ -1.15
VPS4A-203ENST00000564399 SMPD4Q9NXE4 827 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 TRPM5Q9NZQ8 1165 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 KCND2Q9NZV8 630 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 CALCOCO1Q9P1Z2 691 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 SUSD2Q9UGT4 822 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 CYP8B1Q9UNU6 501 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 PCDHB6Q9Y5E3 794 aa7.85□□□□□ -1.15
VPS4A-203ENST00000564399 SPTA1P02549 2419 aa7.84□□□□□ -1.15
VPS4A-203ENST00000564399 IGHV1OR15-9A0A0B4J2B8 117 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms