RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 VPS13AQ96RL7 3174 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 PTPRJQ12913 1337 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 C2orf78A6NCI8 922 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 F8VP50 259 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 TGFB1I1O43294 461 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 HCRTO43612 131 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 RTN3O95197 1032 aaPredicted RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 EGFP01133 1207 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 PTPN1P18031 435 aaKnown RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 ATXN1P54253 815 aaKnown RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 DMWDQ09019 674 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 IFRD2Q12894 506 aaPredicted RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 USP4Q13107 963 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 ELF2Q15723 593 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 ZNF77Q15935 545 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 ZNF699Q32M78 642 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 AASDHQ4L235 1098 aaPredicted RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 IL31Q6EBC2 164 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 FSTL4Q6MZW2 842 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 PRR23CQ6ZRP0 262 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 EPM2AIP1Q7L775 607 aaPredicted RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 PDZD8Q8NEN9 1154 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 SCFD1Q8WVM8 642 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 GAB3Q8WWW8 586 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 DDX1Q92499 740 aaKnown RBP10.18□□□□□ -0.78
CLN6-203ENST00000563917 CCDC34Q96HJ3 373 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 LOXL4Q96JB6 756 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 TNIP3Q96KP6 325 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 C8orf48Q96LL4 319 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 MED10Q9BTT4 135 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 CRTAC1Q9NQ79 661 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 WNT6Q9Y6F9 365 aa10.18□□□□□ -0.78
CLN6-203ENST00000563917 MED19A0JLT2 244 aaPredicted RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 AXIN1O15169 862 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 TADA3O75528 432 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 AKAP3O75969 853 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 APBB3O95704 486 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 STAU1O95793 577 aaKnown RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 CST3P01034 146 aaPredicted RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 TCF3P15923 654 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 YWHAQP27348 245 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 HOXD13P35453 343 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 PXNP49023 591 aaPredicted RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 MYL6P60660 151 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 SRSF5Q13243 272 aaKnown RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 BMT2Q1RMZ1 405 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 EML3Q32P44 896 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 PREPLQ4J6C6 727 aaPredicted RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 RESP18Q5W5W9 173 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 SYT13Q7L8C5 426 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 LIMS2Q7Z4I7 341 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 C12orf56Q8IXR9 622 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 NUP93Q8N1F7 819 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 KIAA1958Q8N8K9 716 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 B3GALNT2Q8NCR0 500 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 RPLP0P6Q8NHW5 317 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 FBXO32Q969P5 355 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 CHFRQ96EP1 664 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 MRPL45Q9BRJ2 306 aaKnown RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 IMPG2Q9BZV3 1241 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 NACA2Q9H009 215 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 PARD6AQ9NPB6 346 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 GCNT4Q9P109 453 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 TBC1D14Q9P2M4 693 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 PCDHA7Q9UN72 937 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 FRMD4BQ9Y2L6 1034 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 DENND4CQ5VZ89 1909 aa10.17□□□□□ -0.78
CLN6-203ENST00000563917 KIF26AQ9ULI4 1882 aaPredicted RBP10.17□□□□□ -0.78
CLN6-203ENST00000563917 GPR179Q6PRD1 2367 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 DCDC2BA2VCK2 349 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 ZNF840PA6NDX5 716 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 OTOL1A6NHN0 477 aaPredicted RBP10.16□□□□□ -0.78
CLN6-203ENST00000563917 LEFTY2O00292 366 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SLC30A4O14863 429 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 CALUO43852 315 aaPredicted RBP10.16□□□□□ -0.78
CLN6-203ENST00000563917 ALDH1A2O94788 518 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 RHOBTB1O94844 696 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 ADH1CP00326 375 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 MYL1P05976 194 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SLFN14P0C7P3 912 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 MBL2P11226 248 aaPredicted RBP10.16□□□□□ -0.78
CLN6-203ENST00000563917 KCNA4P22459 653 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 CASP1P29466 404 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 DGKEP52429 567 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SLC7A9P82251 487 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 TAF10Q12962 218 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 CUL4BQ13620 913 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 NCOA4Q13772 614 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 CCDC142Q17RM4 750 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SCARA3Q6AZY7 606 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 CCDC150Q8NCX0 1101 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms