RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 KIF13BQ9NQT8 1826 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 C10orf71Q711Q0 1435 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 MROH7Q68CQ1 1323 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TXNDC9O14530 226 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TRAFD1O14545 582 aaPredicted RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 MAGEB2O15479 319 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 GLRA2P23416 452 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 UBAP2Q5T6F2 1119 aaKnown RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 TWF2Q6IBS0 349 aaKnown RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 CGB2Q6NT52 195 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 LVRNQ6Q4G3 990 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 EZH1Q92800 747 aaPredicted RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 CYTH2Q99418 400 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 CCDC160A6NGH7 325 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ZNF862O60290 1169 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 UPP2O95045 317 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ETS1P14921 441 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SLC12A2P55011 1212 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SESN2P58004 480 aaPredicted RBP10.91□□□□□ -0.66
RNF40-204ENST00000563683 OVGP1Q12889 678 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 NME3Q13232 169 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 TCEAL1Q15170 157 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 HEATR6Q6AI08 1181 aaKnown RBP10.91□□□□□ -0.66
RNF40-204ENST00000563683 PDZD4Q76G19 769 aaPredicted RBP10.91□□□□□ -0.66
RNF40-204ENST00000563683 B4GALNT2Q8NHY0 566 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 LRRC19Q9H756 370 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SAR1AQ9NR31 198 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 GYG2O15488 501 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ADCY3O60266 1144 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 VTNP04004 478 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 EPHB2P29323 1055 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ARFIP2P53365 341 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 RBP5P82980 135 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ITKQ08881 620 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SPOCD1Q6ZMY3 1216 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
RNF40-204ENST00000563683 CLEC4DQ8WXI8 215 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SLCO2A1Q92959 643 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 GPATCH2LQ9NWQ4 482 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 PSMC3IPQ9P2W1 217 aaPredicted RBP10.91□□□□□ -0.66
RNF40-204ENST00000563683 MARCOQ9UEW3 520 aaPredicted RBP10.91□□□□□ -0.66
RNF40-204ENST00000563683 CHKBQ9Y259 395 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 IRF6O14896 467 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 EDIL3O43854 480 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 KRT38O76015 456 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ZWINTO95229 277 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 CHKAP35790 457 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 TNFSF9P41273 254 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 NCKAP1LP55160 1127 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 OCRLQ01968 901 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SAMD3Q8N6K7 520 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 BEST2Q8NFU1 509 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ATXN7L3BQ96GX2 97 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 CPB2Q96IY4 423 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 SPATC1LQ9H0A9 340 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 RNF19AQ9NV58 838 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ERAP1Q9NZ08 941 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 POLIQ9UNA4 740 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 ITGB4P16144 1822 aa10.91□□□□□ -0.66
RNF40-204ENST00000563683 HBP1O60381 514 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 HUS1O60921 280 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 CYP1A2P05177 515 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 AP1B1Q10567 949 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 MPP2Q14168 576 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 KPNB1Q14974 876 aaKnown RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 ZACNQ401N2 412 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 HACE1Q8IYU2 909 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 SLC16A10Q8TF71 515 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 NT5C1AQ9BXI3 368 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 DENND2DQ9H6A0 471 aaPredicted RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 NMRK1Q9NWW6 199 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 PHLPP1O60346 1717 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 A0A087WZ62 844 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 FOXO6A8MYZ6 492 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 CCDC22O60826 627 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 GJB1P08034 283 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 KCNA3P22001 575 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 ADSSP30520 456 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 PSMC4P43686 418 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 TUBP50607 506 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 RNF220Q5VTB9 566 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 SNX30Q5VWJ9 437 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 SMC1BQ8NDV3 1235 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 HELQQ8TDG4 1101 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 AGAP3Q96P47 875 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 FDXACB1Q9BRP7 624 aaPredicted RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 PORCNQ9H237 461 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 PRMT7Q9NVM4 692 aaPredicted RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 NINJ2Q9NZG7 142 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 SENP1Q9P0U3 644 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 KLHL8Q9P2G9 620 aaPredicted RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 ZC3H7BQ9UGR2 993 aaKnown RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 SMG5Q9UPR3 1016 aaKnown RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 APOL1O14791 398 aa10.9□□□□□ -0.66
RNF40-204ENST00000563683 DYNC1LI2O43237 492 aaPredicted RBP10.9□□□□□ -0.66
RNF40-204ENST00000563683 ENTPD5O75356 428 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms