RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 C2orf15Q8WU43 125 aaKnown RBP18.15■□□□□ 0.5
SPSB3-202ENST00000563668 ASB16Q96NS5 453 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 SYT15Q9BQS2 421 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 MKNK1Q9BUB5 465 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 SDCBP2Q9H190 292 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 DPEP3Q9H4B8 488 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 IL21Q9HBE4 155 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■■■■■ 420.8
SPSB3-202ENST00000563668 DNAI1Q9UI46 699 aa18.15■□□□□ 0.5
SPSB3-202ENST00000563668 PI15O43692 258 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 STAU1O95793 577 aaKnown RBP18.14■□□□□ 0.49
SPSB3-202ENST00000563668 HMGA1P17096 107 aaKnown RBP18.14■□□□□ 0.49
SPSB3-202ENST00000563668 TRIM21P19474 475 aaKnown RBP18.14■□□□□ 0.49
SPSB3-202ENST00000563668 AVPR2P30518 371 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 VIPR2P41587 438 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 VAMP7P51809 220 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 PPP3CAQ08209 521 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 NCOA4Q13772 614 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 ZACNQ401N2 412 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 CWF19L1Q69YN2 538 aaKnown RBP18.14■□□□□ 0.49
SPSB3-202ENST00000563668 WDR59Q6PJI9 974 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 MTSS1LQ765P7 747 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 TRIM59Q8IWR1 403 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 TMEM105Q8N8V8 129 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 SPATA18Q8TC71 538 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 RSPRY1Q96DX4 576 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 SMYD3Q9H7B4 428 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 FBXL21Q9UKT6 434 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 FRMD4BQ9Y2L6 1034 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 HCN4Q9Y3Q4 1203 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 ASB3Q9Y575 518 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 ZDBF2Q9HCK1 2354 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 KMT2EQ8IZD2 1858 aa18.14■□□□□ 0.49
SPSB3-202ENST00000563668 CETN3O15182 167 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 FANCGO15287 622 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 GABRR2P28476 465 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 RAP1GAPP47736 663 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 SMARCB1Q12824 385 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 NFE2Q16621 373 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-202ENST00000563668 TSR1Q2NL82 804 aaKnown RBP18.13■□□□□ 0.49
SPSB3-202ENST00000563668 SPOPLQ6IQ16 392 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 TMEM150AQ86TG1 271 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 SUGP1Q8IWZ8 645 aaKnown RBP18.13■□□□□ 0.49
SPSB3-202ENST00000563668 FAM186BQ8IYM0 893 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 TSC1Q92574 1164 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 PCMTD1Q96MG8 357 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-202ENST00000563668 CHP1Q99653 195 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 WNT16Q9UBV4 365 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 TACC1O75410 805 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 ECI2O75521 394 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 PCSK1P29120 753 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 ATICP31939 592 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 GNL1P36915 607 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-202ENST00000563668 GCLMP48507 274 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 TNNC1P63316 161 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 CYP4F8P98187 520 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 CDK17Q00537 523 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 GRM2Q14416 872 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 LEMD2Q8NC56 503 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 FLCNQ8NFG4 579 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 OR6B3Q8NGW1 331 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 ZSCAN18Q8TBC5 510 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-202ENST00000563668 MYLPFQ96A32 169 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 EDEM3Q9BZQ6 932 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 ATXN3LQ9H3M9 355 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 VRTNQ9H8Y1 702 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 SLC2A4RGQ9NR83 387 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 CDH9Q9ULB4 789 aa18.13■□□□□ 0.49
SPSB3-202ENST00000563668 MAPK13O15264 365 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 HNRNPH3P31942 346 aaKnown RBP18.12■□□□□ 0.49
SPSB3-202ENST00000563668 PSMC2P35998 433 aaKnown RBP18.12■□□□□ 0.49
SPSB3-202ENST00000563668 AP3M2P53677 418 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 ZNF699Q32M78 642 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 VITQ6UXI7 678 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 SCARA5Q6ZMJ2 495 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 ITIH5Q86UX2 942 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 SPATA2LQ8IUW3 424 aaPredicted RBP18.12■□□□□ 0.49
SPSB3-202ENST00000563668 ACRBPQ8NEB7 543 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 PRSS33Q8NF86 280 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 ZNF397Q8NF99 534 aaPredicted RBP18.12■□□□□ 0.49
SPSB3-202ENST00000563668 SMARCD2Q92925 531 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 ELSPBP1Q96BH3 223 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 PCED1BQ96HM7 432 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 LRRC3BQ96PB8 259 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 SNX25Q9H3E2 840 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 MMRN2Q9H8L6 949 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 TMEM30AQ9NV96 361 aa18.12■□□□□ 0.49
SPSB3-202ENST00000563668 EPN1Q9Y6I3 576 aaPredicted RBP18.12■□□□□ 0.49
SPSB3-202ENST00000563668 NDUFA10O95299 355 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 HLA-DRAP01903 254 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 BDNFP23560 247 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 RPL13P26373 211 aaKnown RBP18.11■□□□□ 0.49
SPSB3-202ENST00000563668 CACNA2D1P54289 1103 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 GNG11P61952 73 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 VEPH1Q14D04 833 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 CFAP221Q4G0U5 840 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 MDH1BQ5I0G3 518 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 FRMD5Q7Z6J6 570 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 TAS1R2Q8TE23 839 aa18.11■□□□□ 0.49
SPSB3-202ENST00000563668 WDR24Q96S15 920 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms