RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 MAP3K6O95382 1288 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CYLC2Q14093 348 aaPredicted RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 C1orf220Q5T0J3 134 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 RMDN3Q96TC7 470 aa13.29□□□□□ -0.28
CCDC187-201ENST00000563590 TRIM56Q9BRZ2 755 aaKnown RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 MAGED2Q9UNF1 606 aaPredicted RBP13.29□□□□□ -0.28
CCDC187-201ENST00000563590 PRR5-ARHGAP8B1AHC4 643 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 ARHGAP8P85298 464 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 DLG1Q12959 904 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 PDK3Q15120 406 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 IL31RAQ8NI17 732 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 FAM81BQ96LP2 452 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 WDR18Q9BV38 432 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 MRPL1Q9BYD6 325 aaKnown RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 C1orf112Q9NSG2 853 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 KLRG2A4D1S0 409 aaPredicted RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 CAPN8A6NHC0 703 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 SRGAP2CP0DJJ0 459 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 TCN1P20061 433 aaPredicted RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 HSP90AA5PQ58FG0 334 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 PPP6R3Q5H9R7 873 aaPredicted RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 SEMA4DQ92854 862 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 GATA6Q92908 595 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
CCDC187-201ENST00000563590 SEL1LQ9UBV2 794 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 DOLKQ9UPQ8 538 aa13.28□□□□□ -0.28
CCDC187-201ENST00000563590 SIGLEC16A6NMB1 481 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 MUTP22033 750 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 INHBCP55103 352 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 WDR44Q5JSH3 913 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 SWSAP1Q6NVH7 229 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 CASC4Q6P4E1 433 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 TMEM143Q96AN5 459 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 HSPBP1Q9NZL4 362 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.28
CCDC187-201ENST00000563590 PROCP04070 461 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 RAG1P15918 1043 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 PMLP29590 882 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 TAS2R40P59535 323 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 LMNB2Q03252 620 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 MTMR1Q13613 665 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 TRMT5Q32P41 509 aaKnown RBP13.27□□□□□ -0.28
CCDC187-201ENST00000563590 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 ZCCHC9Q8N567 271 aaKnown RBP13.27□□□□□ -0.28
CCDC187-201ENST00000563590 CCDC33Q8N5R6 958 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 LRGUKQ96M69 825 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 NACC1Q96RE7 527 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 NR1H4Q96RI1 486 aaPredicted RBP13.27□□□□□ -0.28
CCDC187-201ENST00000563590 CALN1Q9BXU9 219 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 PCSK1NQ9UHG2 260 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 SLC7A8Q9UHI5 535 aa13.27□□□□□ -0.28
CCDC187-201ENST00000563590 UBE4BO95155 1302 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 IQANK1A0A1B0GTG1 560 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 DENND3A2RUS2 1198 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 PRPF4O43172 522 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC187-201ENST00000563590 DGKIO75912 1065 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.29
CCDC187-201ENST00000563590 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 FAXCQ5TGI0 409 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 DAW1Q8N136 415 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 TAS1R2Q8TE23 839 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 PANX3Q96QZ0 392 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 RMI1Q9H9A7 625 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 TUFT1Q9NNX1 390 aa13.27□□□□□ -0.29
CCDC187-201ENST00000563590 MRPL11Q9Y3B7 192 aaKnown RBP13.27□□□□□ -0.29
CCDC187-201ENST00000563590 TTC36A6NLP5 189 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 FAM155BO75949 473 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 FOSP01100 380 aaPredicted RBP13.26□□□□□ -0.29
CCDC187-201ENST00000563590 CIITAP33076 1130 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 CCR3P51677 355 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 NFX1Q12986 1120 aaKnown RBP13.26□□□□□ -0.29
CCDC187-201ENST00000563590 GSTA3Q16772 222 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 CTC1Q2NKJ3 1217 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 RALGPS1Q5JS13 557 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 GRAMD4Q6IC98 578 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 ACAD10Q6JQN1 1059 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 TMEM270Q6UE05 265 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 SLC9A9Q8IVB4 645 aa13.26□□□□□ -0.29
CCDC187-201ENST00000563590 WWP1Q9H0M0 922 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms