RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TAF1BQ53T94 588 aaPredicted RBP13.69□□□□□ -0.22
USB1-207ENST00000563149 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 SH3D19Q5HYK7 790 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 UNC45BQ8IWX7 931 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 APBB2Q92870 758 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 MRRFQ96E11 262 aaKnown RBP13.69□□□□□ -0.22
USB1-207ENST00000563149 MTO1Q9Y2Z2 717 aaKnown RBP13.69□□□□□ -0.22
USB1-207ENST00000563149 LRRC42Q9Y546 428 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 EP400Q96L91 3159 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 CHADO15335 359 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 LPXNO60711 386 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 CCDC22O60826 627 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 BANF1O75531 89 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 TMEM63AO94886 807 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 RBP3P10745 1247 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 FGFR1P11362 822 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 CD19P15391 556 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 TFDP2Q14188 446 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 NOMO1Q15155 1222 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 ZNF667Q5HYK9 610 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 NOL9Q5SY16 702 aaKnown RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 BZW1Q7L1Q6 419 aaKnown RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 KIAA0319LQ8IZA0 1049 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 APOPT1Q96IL0 206 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 WDR83Q9BRX9 315 aaKnown RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 MIS12Q9H081 205 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 FAM124BQ9H5Z6 455 aaPredicted RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 NPHS2Q9NP85 383 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 METTL5Q9NRN9 209 aaKnown RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 IKBKGQ9Y6K9 419 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 ACKR2O00590 384 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 KLF11O14901 512 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 TPBGLP0DKB5 382 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 MARK3P27448 753 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 RXRBP28702 533 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 NEK3P51956 506 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 RAD23BP54727 409 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 ROR1Q01973 937 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 EFTUD2Q15029 972 aaKnown RBP eCLIP13.68□□□□□ -0.22
USB1-207ENST00000563149 CTC1Q2NKJ3 1217 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 SMTNL2Q2TAL5 461 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 KCNT1Q5JUK3 1230 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 SCARA5Q6ZMJ2 495 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 MICALL2Q8IY33 904 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 FZD8Q9H461 694 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 SYNCQ9H7C4 482 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 DCLRE1BQ9H816 532 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
USB1-207ENST00000563149 CYTH4Q9UIA0 394 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 USP18Q9UMW8 372 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 POLIQ9UNA4 740 aa13.68□□□□□ -0.22
USB1-207ENST00000563149 TCRBV7S3A2A0A539 114 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 LGR5O75473 907 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 HAUS5O94927 633 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 INHBAP08476 426 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 MIPP30301 263 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 ATICP31939 592 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 ETV4P43268 484 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 ARFIP2P53365 341 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 BASP1P80723 227 aaKnown RBP13.67□□□□□ -0.22
USB1-207ENST00000563149 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 GAD2Q05329 585 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 PTK7Q13308 1070 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 KRT72Q14CN4 511 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 TAF11Q15544 211 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 ATF7IP2Q5U623 682 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 FAM91A1Q658Y4 838 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 ZNF449Q6P9G9 518 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
USB1-207ENST00000563149 TRIM42Q8IWZ5 723 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 NAF1Q96HR8 494 aaKnown RBP13.67□□□□□ -0.22
USB1-207ENST00000563149 NSL1Q96IY1 281 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 CPXM1Q96SM3 734 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 VRTNQ9H8Y1 702 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 PAK5Q9P286 719 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 AFG3L2Q9Y4W6 797 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 TEX264Q9Y6I9 313 aa13.67□□□□□ -0.22
USB1-207ENST00000563149 CBX6O95503 412 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 HMGCRP04035 888 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 ERBB2P04626 1255 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 GSTA2P09210 222 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 VDRP11473 427 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 EPHB2P29323 1055 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms