RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZDHHC24Q6UX98 284 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 TMEM110Q86TL2 294 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 HACE1Q8IYU2 909 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 TOP6BLQ8N6T0 577 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SLC2A14Q8TDB8 520 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SLCO2A1Q92959 643 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 RUNDC3BQ96NL0 473 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ZIM3Q96PE6 472 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 B3GNT5Q9BYG0 378 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 TRPV6Q9H1D0 765 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 FAN1Q9Y2M0 1017 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 GIT1Q9Y2X7 761 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 C2CD4BA6NLJ0 364 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 WARSP23381 471 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ACAT1P24752 427 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 TKTP29401 623 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ZNF143P52747 638 aaPredicted RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 PLTPP55058 493 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ALS2CLQ60I27 953 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 POLNQ7Z5Q5 900 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 IQCKQ8N0W5 287 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 GOLGA6L1Q8N7Z2 621 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ANKRD52Q8NB46 1076 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 C3orf58Q8NDZ4 430 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 FAM71BQ8TC56 605 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 RXFP2Q8WXD0 754 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ADAM2Q99965 735 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 PAAF1Q9BRP4 392 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 DDX56Q9NY93 547 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 PCSK1NQ9UHG2 260 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 PDCD11Q14690 1871 aaKnown RBP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CASTOR2A6NHX0 329 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 PAPSS1O43252 624 aaPredicted RBP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 HSF2BPO75031 334 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 SETSIPP0DME0 302 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 PDGFRAP16234 1089 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 MIPP30301 263 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CDKN2BP42772 138 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 KRT17Q04695 432 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 PPP1R7Q15435 360 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 UAP1Q16222 522 aaPredicted RBP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 C15orf59Q2T9L4 293 aaPredicted RBP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 TFDP3Q5H9I0 405 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 FAM26DQ5JW98 314 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 TMC3Q7Z5M5 1100 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 B3GALNT2Q8NCR0 500 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 FBXO25Q8TCJ0 367 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 KHSRPQ92945 711 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 GLT1D1Q96MS3 346 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 FMO2Q99518 471 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 TRAIPQ9BWF2 469 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 MIS12Q9H081 205 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 hCG_1818297A0A087WSY0 165 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 A0A0U1RQF3 1178 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 ZNF623O75123 536 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 RNF40O75150 1001 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 KRT7P08729 469 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 GPD1P21695 349 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 ACTN2P35609 894 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 MAP2K2P36507 400 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 HSD17B3P37058 310 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CETN2P41208 172 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 BCAT1P54687 386 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 SLC6A3Q01959 620 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 BST2Q10589 180 aaKnown RBP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CCNG2Q16589 344 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 HADHQ16836 314 aaKnown RBP9.88□□□□□ -0.83
LINC00838-201ENST00000562956 KIAA0319Q5VV43 1072 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CLEC4CQ8WTT0 213 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 STK32AQ8WU08 396 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 SENP8Q96LD8 212 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CCDC114Q96M63 670 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 CFAP57Q96MR6 1250 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 PEBP4Q96S96 227 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 ASNSD1Q9NWL6 643 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 USP18Q9UMW8 372 aa9.88□□□□□ -0.83
LINC00838-201ENST00000562956 A0A1W2PQ45 241 aaPredicted RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 A0A1W2PQY0 241 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 MOXD2PA6NHM9 499 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CLDN5O00501 218 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 GABRDO14764 452 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 RNF8O76064 485 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TJP3O95049 919 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 POMCP01189 267 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CD48P09326 243 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CKBP12277 381 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 PTPN7P35236 360 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 COPS2P61201 443 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 DHX9Q08211 1270 aaKnown RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 ACAP1Q15027 740 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TRIP13Q15645 432 aaPredicted RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CCDC14Q49A88 953 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CFAP58Q5T655 872 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 ATL2Q8NHH9 583 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 ZNF296Q8WUU4 475 aaPredicted RBP9.87□□□□□ -0.83
LINC00838-201ENST00000562956 TNIP3Q96KP6 325 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 SH3GL2Q99962 352 aa9.87□□□□□ -0.83
LINC00838-201ENST00000562956 CNPY3Q9BT09 278 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms