RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 BEST1O76090 585 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 GTF2F1P35269 517 aaKnown RBP eCLIP14.78□□□□□ -0.04
SPG7-206ENST00000562775 PBX3P40426 434 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 PAFAH1B1P43034 410 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 MAP3K7CLP57077 242 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 OGDHQ02218 1023 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 ZNF252P-AS1Q0IIN9 211 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 BTG3Q14201 252 aaPredicted RBP14.78□□□□□ -0.04
SPG7-206ENST00000562775 ZNF280DQ6N043 979 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 FAM117BQ6P1L5 589 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 ZNF365Q70YC5 407 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 TMCO2Q7Z6W1 182 aaPredicted RBP14.78□□□□□ -0.04
SPG7-206ENST00000562775 TMEM173Q86WV6 379 aaPredicted RBP14.78□□□□□ -0.04
SPG7-206ENST00000562775 CEP57Q86XR8 500 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 CPNE8Q86YQ8 564 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 SCUBE3Q8IX30 993 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 NIPA2Q8N8Q9 360 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 BCL7CQ8WUZ0 217 aaPredicted RBP14.78□□□□□ -0.04
SPG7-206ENST00000562775 SMOQ99835 787 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 CARD9Q9H257 536 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 CSNK1G1Q9HCP0 422 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 TMLHEQ9NVH6 421 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 TMEM59LQ9UK28 342 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 PCDHA3Q9Y5H8 950 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 VWA8A3KMH1 1905 aa14.78□□□□□ -0.04
SPG7-206ENST00000562775 CTAGE15A4D2H0 777 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 OR6C75A6NL08 312 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 EFEMP2O95967 443 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 CTAGE8P0CG41 777 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 LCP1P13796 627 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 PEX5P50542 639 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 NFE2Q16621 373 aaPredicted RBP14.77□□□□□ -0.04
SPG7-206ENST00000562775 CFAP221Q4G0U5 840 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 CTXN3Q4LDR2 81 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 SPOUT1Q5T280 376 aaKnown RBP14.77□□□□□ -0.04
SPG7-206ENST00000562775 CCDC181Q5TID7 509 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 PSRC1Q6PGN9 363 aaPredicted RBP14.77□□□□□ -0.04
SPG7-206ENST00000562775 KCNT2Q6UVM3 1135 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 CTAGE6Q86UF2 777 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 SPATA2LQ8IUW3 424 aaPredicted RBP14.77□□□□□ -0.04
SPG7-206ENST00000562775 CTAGE4Q8IX94 777 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 ZMIZ2Q8NF64 920 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 KRT35Q92764 455 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 IGSF21Q96ID5 467 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 RPGRIP1Q96KN7 1286 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 ZNF558Q96NG5 402 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 HTATIP2Q9BUP3 242 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 OXCT2Q9BYC2 517 aaPredicted RBP14.77□□□□□ -0.04
SPG7-206ENST00000562775 LRRC4Q9HBW1 653 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.04
SPG7-206ENST00000562775 ZBBXA8MT70 800 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 EFCAB8A8MWE9 144 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 H7C4K7 107 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 PDE2AO00408 941 aaPredicted RBP14.77□□□□□ -0.05
SPG7-206ENST00000562775 CTIFO43310 598 aaKnown RBP14.77□□□□□ -0.05
SPG7-206ENST00000562775 CEP104O60308 925 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 LAG3P18627 525 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 BDNFP23560 247 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 PSMA2P25787 234 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 ACAP1Q15027 740 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 TMEM240Q5SV17 173 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 ANKS3Q6ZW76 656 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 SLC26A9Q7LBE3 791 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 ARCQ7LC44 396 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 ZNF572Q7Z3I7 529 aaPredicted RBP14.77□□□□□ -0.05
SPG7-206ENST00000562775 RNF168Q8IYW5 571 aaPredicted RBP14.77□□□□□ -0.05
SPG7-206ENST00000562775 EMC1Q8N766 993 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 LRRN4CLQ8ND94 238 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 ALG3Q92685 438 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 KHSRPQ92945 711 aaKnown RBP eCLIP14.77□□□□□ -0.051e-9■□□□□ 9.7
SPG7-206ENST00000562775 PIWIL1Q96J94 861 aaKnown RBP14.77□□□□□ -0.05
SPG7-206ENST00000562775 KCNK16Q96T55 309 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 TTPALQ9BTX7 342 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 DMAP1Q9NPF5 467 aaPredicted RBP14.77□□□□□ -0.05
SPG7-206ENST00000562775 USTQ9Y2C2 406 aa14.77□□□□□ -0.05
SPG7-206ENST00000562775 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.77□□□□□ -0.05
SPG7-206ENST00000562775 UQCRHLA0A096LP55 91 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 C2CD4BA6NLJ0 364 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 F8VP50 259 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 PSTPIP1O43586 416 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 TBC1D4O60343 1298 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 TADA3O75528 432 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 UQCRHP07919 91 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 OR4Q2P0C623 313 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 GPD1P21695 349 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 MARCKSL1P49006 195 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 CDR1P51861 262 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 CACNA2D1P54289 1103 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 RWDD2BP57060 319 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 RNASE9P60153 205 aaKnown RBP14.76□□□□□ -0.05
SPG7-206ENST00000562775 ITIH3Q06033 890 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 ADIGQ0VDE8 80 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 USP41Q3LFD5 358 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 SLC39A12Q504Y0 691 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 RAB41Q5JT25 222 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 EFHC1Q5JVL4 640 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 RTP2Q5QGT7 225 aa14.76□□□□□ -0.05
SPG7-206ENST00000562775 CC2D1AQ6P1N0 951 aaPredicted RBP14.76□□□□□ -0.05
SPG7-206ENST00000562775 RHOT1Q8IXI2 618 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms