RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SLC7A5Q01650 507 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 KCNMA1Q12791 1236 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 GPS1Q13098 491 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 BYSLQ13895 437 aaKnown RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 DCAF6Q58WW2 860 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 TOP6BLQ8N6T0 577 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 C3orf20Q8ND61 904 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 LACRTQ9GZZ8 138 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 DDX43Q9NXZ2 648 aaKnown RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 TUBA8Q9NY65 449 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 LLGL1Q15334 1064 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 GJC2Q5T442 439 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 EEF1DP3Q658K8 133 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 SPOPLQ6IQ16 392 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ZNF449Q6P9G9 518 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 MAMDC4Q6UXC1 1216 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ANKRD7Q92527 254 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 CAPS2Q9BXY5 557 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 FZD8Q9H461 694 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 DMAP1Q9NPF5 467 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 OLA1Q9NTK5 396 aaKnown RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 INTS9Q9NV88 658 aaKnown RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 TRIM10Q9UDY6 481 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 STK39Q9UEW8 545 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 TSPAN16Q9UKR8 245 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 POLIQ9UNA4 740 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 PTCH2Q9Y6C5 1203 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 PQBP1O60828 265 aaKnown RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 ZMYND10O75800 440 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 PNMA6AP0CW24 399 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 INAQ16352 499 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 TSNAXIP1Q2TAA8 658 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 MEI1Q5TIA1 1274 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 SLC20A1Q8WUM9 679 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 MIEF2Q96C03 454 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 SEPT5Q99719 369 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 OXCT2Q9BYC2 517 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.88□□□□□ -1.15
TCF4-216ENST00000562680 TLL2Q9Y6L7 1015 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ENO4A6NNW6 628 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 MAGEA8P43361 318 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 PMS2P54278 862 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 SMARCB1Q12824 385 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 STAT4Q14765 748 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 TRIP13Q15645 432 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 FAM187BQ17R55 369 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ARHGAP15Q53QZ3 475 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 LRRC38Q5VT99 294 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ITIH5Q86UX2 942 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 SLC7A14Q8TBB6 771 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 C18orf25Q96B23 403 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 GAD1Q99259 594 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 FSD1LQ9BXM9 530 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 TXNRD2Q9NNW7 524 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 FAM105AQ9NUU6 356 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ABI2Q9NYB9 513 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 TLK1Q9UKI8 766 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 CDH9Q9ULB4 789 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ST3GAL5Q9UNP4 418 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 FARP1Q9Y4F1 1045 aaPredicted RBP7.88□□□□□ -1.15
TCF4-216ENST00000562680 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 NCANO14594 1321 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 RTN3O95197 1032 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 ACO1P21399 889 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 ETFBP38117 255 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 PPM1FP49593 454 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 PAPOLAP51003 745 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 ARSEP51690 589 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 PTK7Q13308 1070 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ARHGAP22Q7Z5H3 698 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 SENP8Q96LD8 212 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 YME1L1Q96TA2 773 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 SIK2Q9H0K1 926 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 KRT82Q9NSB4 513 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 AMACRQ9UHK6 382 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ARIH1Q9Y4X5 557 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 GOLGA8QA0A0J9YX86 632 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 GOLGA8OA6NCC3 632 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 GOLGA8NF8WBI6 632 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 CSDE1O75534 798 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 MOCS2O96007 188 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 NCAM1P13591 858 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TUFMP49411 452 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 HARS2P49590 506 aaKnown RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 MAPK7Q13164 816 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 ZNF235Q14590 738 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 E2F5Q15329 346 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 RYBPQ8N488 228 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 CD99L2Q8TCZ2 262 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 COG1Q8WTW3 980 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 C1orf54Q8WWF1 131 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 BSNDQ8WZ55 320 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 EMID1Q96A84 441 aaPredicted RBP7.87□□□□□ -1.15
TCF4-216ENST00000562680 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.87□□□□□ -1.15
TCF4-216ENST00000562680 PGAP2Q9UHJ9 254 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 CAPN6Q9Y6Q1 641 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 TISP43B9A030 160 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 SPECC1L-ADORA2AF8WAN1 911 aa7.87□□□□□ -1.15
TCF4-216ENST00000562680 NCAM2O15394 837 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms