RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 SETD3Q86TU7 594 aaPredicted RBP11.66□□□□□ -0.54
RPAP1-204ENST00000562303 PRPF39Q86UA1 669 aaKnown RBP11.66□□□□□ -0.54
RPAP1-204ENST00000562303 CNDP1Q96KN2 507 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 SHCBP1LQ9BZQ2 653 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 AGPAT5Q9NUQ2 364 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 SUPT7LO94864 414 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 SUPT20HL2P0C7V6 817 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 PCNAP12004 261 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 ADGRF2Q8IZF7 708 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 RMND5AQ9H871 391 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 DPP7Q9UHL4 492 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 AAR2Q9Y312 384 aaKnown RBP11.66□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF711Q9Y462 761 aa11.66□□□□□ -0.54
RPAP1-204ENST00000562303 MAPK1P28482 360 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 PDIA6Q15084 440 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 GALNTL6Q49A17 601 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 FAXCQ5TGI0 409 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CD302Q8IX05 232 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 DPF2Q92785 391 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 KAT2BQ92831 832 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CLPBQ9H078 707 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 PAPOLBQ9NRJ5 636 aaKnown RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 H0YC42 278 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 M0R3G1 203 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 KRT34O76011 436 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CSTF3Q12996 717 aaKnown RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 KYNUQ16719 465 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CEP78Q5JTW2 689 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 ARHGAP17Q68EM7 881 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 UNC45BQ8IWX7 931 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 IGDCC4Q8TDY8 1250 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 TUBGCP3Q96CW5 907 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 MKNK1Q9BUB5 465 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 GEMIN8Q9NWZ8 242 aaKnown RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 VTNP04004 478 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 ICAM1P05362 532 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 TNNI3P19429 210 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 RRM2P31350 389 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CLCN3P51790 818 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 TERF2Q15554 542 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CYP51A1Q16850 503 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 PGS1Q32NB8 556 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 DENND1BQ6P3S1 775 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CCDC60Q8IWA6 550 aaPredicted RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CAMKK2Q96RR4 588 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 MANSC1Q9H8J5 431 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CHORDC1Q9UHD1 332 aaPredicted RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 USP15Q9Y4E8 981 aaPredicted RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 SPATA31A6Q5VVP1 1343 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 KPNA1P52294 538 aaPredicted RBP11.65□□□□□ -0.54
RPAP1-204ENST00000562303 TGM3Q08188 693 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 STARD3Q14849 445 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 WLSQ5T9L3 541 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 MICU2Q8IYU8 434 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 CYP39A1Q9NYL5 469 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 DSEQ9UL01 958 aa11.65□□□□□ -0.54
RPAP1-204ENST00000562303 A0A1B0GTH6 734 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 B2RBV5 119 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 PSMD12O00232 456 aaPredicted RBP11.65□□□□□ -0.55
RPAP1-204ENST00000562303 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.556e-6■■■■□ 20
RPAP1-204ENST00000562303 TRIP10Q15642 601 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 FBXO16Q8IX29 292 aaPredicted RBP11.65□□□□□ -0.55
RPAP1-204ENST00000562303 AGGF1Q8N302 714 aaeCLIP11.65□□□□□ -0.55
RPAP1-204ENST00000562303 MIER2Q8N344 545 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 CPB2Q96IY4 423 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 ALG6Q9Y672 507 aa11.65□□□□□ -0.55
RPAP1-204ENST00000562303 OGTO15294 1046 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 GCLCP48506 637 aaPredicted RBP11.64□□□□□ -0.55
RPAP1-204ENST00000562303 ZNF280DQ6N043 979 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 GJB7Q6PEY0 223 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 MTSS1LQ765P7 747 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 WDR24Q96S15 920 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 BBS2Q9BXC9 721 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 SYBUQ9NX95 663 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 RUVBL2Q9Y230 463 aaKnown RBP11.64□□□□□ -0.55
RPAP1-204ENST00000562303 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
RPAP1-204ENST00000562303 SKAP2O75563 359 aaPredicted RBP11.64□□□□□ -0.55
RPAP1-204ENST00000562303 CPSF4O95639 269 aaKnown RBP11.64□□□□□ -0.55
RPAP1-204ENST00000562303 F9P00740 461 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 CYP11B2P19099 503 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 VSNL1P62760 191 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 ITIH5Q86UX2 942 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 DEPDC7Q96QD5 511 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 UTP6Q9NYH9 597 aaKnown RBP11.64□□□□□ -0.55
RPAP1-204ENST00000562303 CPA4Q9UI42 421 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 RPS6KL1Q9Y6S9 549 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 MGAT4DA6NG13 374 aa11.64□□□□□ -0.55
RPAP1-204ENST00000562303 SNTNA6NMZ2 147 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms