RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 RNF43Q68DV7 783 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 METTL7BQ6UX53 244 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 POLNQ7Z5Q5 900 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 LONP2Q86WA8 852 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 ECHDC2Q86YB7 292 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 LMNTD2Q8IXW0 634 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 JOSD2Q8TAC2 188 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 SLC35B2Q8TB61 432 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 SLC16A10Q8TF71 515 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 RSAD2Q8WXG1 361 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 INO80B-WBP1J3KQ70 363 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
NEIL1-202ENST00000561643 PRPF4O43172 522 aaKnown RBP eCLIP11.49□□□□□ -0.573e-7■■■■■ 27.4
NEIL1-202ENST00000561643 HOXC6P09630 235 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 CDH5P33151 784 aaPredicted RBP11.49□□□□□ -0.57
NEIL1-202ENST00000561643 RAD23BP54727 409 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 MGAT5Q09328 741 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 ORC1Q13415 861 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 PCGF5Q86SE9 256 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 TEX9Q8N6V9 391 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 FBF1Q8TES7 1133 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 PYROXD1Q8WU10 500 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 NLRP4Q96MN2 994 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 INO80BQ9C086 356 aaPredicted RBP11.49□□□□□ -0.57
NEIL1-202ENST00000561643 SPON1Q9HCB6 807 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 DLGAP2Q9P1A6 1054 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
NEIL1-202ENST00000561643 PHTF1Q9UMS5 762 aa11.49□□□□□ -0.57
NEIL1-202ENST00000561643 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 LRCH4O75427 683 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ALDH3A1P30838 453 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 RPA3P35244 121 aaPredicted RBP11.48□□□□□ -0.57
NEIL1-202ENST00000561643 GDF10P55107 478 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 MTM1Q13496 603 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SETDB1Q15047 1291 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 EMC1Q8N766 993 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 XYLT2Q9H1B5 865 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ARHGEF3Q9NR81 526 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 PCSK1NQ9UHG2 260 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 H0Y3Z8 333 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 MED7O43513 233 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 IL1R2P27930 398 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 PHBP35232 272 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ARL4CP56559 192 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 CUL3Q13618 768 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ATF7IP2Q5U623 682 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 MPZL3Q6UWV2 235 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 PPIL6Q8IXY8 311 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 C2orf40Q9H1Z8 148 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SLCO1B3Q9NPD5 702 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 WDR35Q9P2L0 1181 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SIP14410 1827 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 A0A1W2PPM1 405 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 GJB1P08034 283 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SSTR1P30872 391 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 CDH8P55286 799 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 GEMIN4P57678 1058 aaKnown RBP11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SLC25A11Q02978 314 aaKnown RBP11.48□□□□□ -0.57
NEIL1-202ENST00000561643 GAD2Q05329 585 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ACVR2BQ13705 512 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 SEPT7Q16181 437 aaKnown RBP11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ZNF667Q5HYK9 610 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 ANKRD22Q5VYY1 191 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 RFX6Q8HWS3 928 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 KCTD6Q8NC69 237 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 FAM81AQ8TBF8 368 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 DENND1AQ8TEH3 1009 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 PPCSQ9HAB8 311 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 METTL5Q9NRN9 209 aaKnown RBP11.48□□□□□ -0.57
NEIL1-202ENST00000561643 PCMTD2Q9NV79 361 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 STARD13Q9Y3M8 1113 aa11.48□□□□□ -0.57
NEIL1-202ENST00000561643 C3orf70A6NLC5 250 aaPredicted RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ABLIM1O14639 778 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 B4GALT5O43286 388 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 PIAS1O75925 651 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 TGFB3P10600 412 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 KRT4P19013 534 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 KDELR1P24390 212 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 EDNRBP24530 442 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 MRPS35P82673 323 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 TFDP1Q14186 410 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 BBS12Q6ZW61 710 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ANKRD23Q86SG2 305 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 VSIG1Q86XK7 387 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ATP11CQ8NB49 1132 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CPT1BQ92523 772 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 HSPH1Q92598 858 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms