RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 NFKBIBQ15653 356 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 MIIPQ5JXC2 388 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 SCN4BQ8IWT1 228 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 PPM1KQ8N3J5 372 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 UBR7Q8N806 425 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 ELMO3Q96BJ8 720 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 CYFIP2Q96F07 1278 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 TRMT2BQ96GJ1 504 aaKnown RBP10.18□□□□□ -0.78
LINC00566-201ENST00000561557 SMARCD1Q96GM5 515 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 MYRFLQ96LU7 910 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 HEXIM2Q96MH2 286 aaKnown RBP10.18□□□□□ -0.78
LINC00566-201ENST00000561557 MED10Q9BTT4 135 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
LINC00566-201ENST00000561557 CSNK1G1Q9HCP0 422 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00566-201ENST00000561557 HCFC1R1Q9NWW0 138 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 LIMA1Q9UHB6 759 aaKnown RBP10.18□□□□□ -0.78
LINC00566-201ENST00000561557 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 DAAM1Q9Y4D1 1078 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 DENND4AQ7Z401 1863 aa10.18□□□□□ -0.78
LINC00566-201ENST00000561557 NOTCH4Q99466 2003 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 SYCE3A1L190 88 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 SLC38A8A6NNN8 435 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 BECN2A8MW95 431 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 SOAT2O75908 522 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 RTN3O95197 1032 aaPredicted RBP10.17□□□□□ -0.78
LINC00566-201ENST00000561557 VDRP11473 427 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 MYL4P12829 197 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 LAMP2P13473 410 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 ZNF18P17022 549 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 HMGA1P17096 107 aaKnown RBP10.17□□□□□ -0.78
LINC00566-201ENST00000561557 RFX1P22670 979 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 DDX6P26196 483 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00566-201ENST00000561557 PON1P27169 355 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 WEE1P30291 646 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 RAD23BP54727 409 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 LRMPQ12912 555 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 KRT31Q15323 416 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 STILQ15468 1287 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 DDR2Q16832 855 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 ZSCAN23Q3MJ62 389 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 ARHGAP15Q53QZ3 475 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 FKBP15Q5T1M5 1219 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 ARHGAP17Q68EM7 881 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 PHLDB3Q6NSJ2 640 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 TRIM65Q6PJ69 517 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 DENND5BQ6ZUT9 1274 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 PAQR9Q6ZVX9 377 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 MTSS1LQ765P7 747 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 GET4Q7L5D6 327 aaPredicted RBP10.17□□□□□ -0.78
LINC00566-201ENST00000561557 FAM35AQ86V20 835 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 TMC8Q8IU68 726 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 FUKQ8N0W3 1084 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 AOPEPQ8N6M6 819 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 SLC4A11Q8NBS3 891 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 ITFG1Q8TB96 612 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 FEZF2Q8TBJ5 459 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 GIPC2Q8TF65 315 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 FGF13Q92913 245 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 GCNAQ96QF7 691 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 TWNKQ96RR1 684 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 MYADMQ96S97 322 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 LPIN3Q9BQK8 851 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 CRACR2AQ9BSW2 395 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 UBXN6Q9BZV1 441 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 PNPLA8Q9NP80 782 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 UBE2TQ9NPD8 197 aaPredicted RBP10.17□□□□□ -0.78
LINC00566-201ENST00000561557 DMAP1Q9NPF5 467 aaPredicted RBP10.17□□□□□ -0.78
LINC00566-201ENST00000561557 APEX2Q9UBZ4 518 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 CNTN6Q9UQ52 1028 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 PTPRDP23468 1912 aa10.17□□□□□ -0.78
LINC00566-201ENST00000561557 COL6A3P12111 3177 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 ANHXE9PGG2 379 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 F8VP50 259 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 CLDN5O00501 218 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 MOSPD3O75425 235 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 AP1G2O75843 785 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 F11P03951 625 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 FAM200BP0CF97 657 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 ALADP13716 330 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 PFKLP17858 780 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 SLC9A1P19634 815 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 ACO1P21399 889 aaKnown RBP10.16□□□□□ -0.78
LINC00566-201ENST00000561557 GABRR2P28476 465 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 SLC8A3P57103 927 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 TPM4P67936 248 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 ZNF394Q53GI3 561 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 SGO2Q562F6 1265 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 HSP90AA4PQ58FG1 418 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 RRAGAQ7L523 313 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 RNF135Q8IUD6 432 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 ARHGEF19Q8IW93 802 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 NUP93Q8N1F7 819 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 C12orf29Q8N999 325 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 SHKBP1Q8TBC3 707 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 SLC2A14Q8TDB8 520 aa10.16□□□□□ -0.78
LINC00566-201ENST00000561557 OVCA2Q8WZ82 227 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms