RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 PNKPQ96T60 521 aa12.93□□□□□ -0.34
CRTC3-213ENST00000561255 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
CRTC3-213ENST00000561255 FSCN3Q9NQT6 498 aa12.93□□□□□ -0.34
CRTC3-213ENST00000561255 PLXNB3Q9ULL4 1909 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 KAT7O95251 611 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 CYP17A1P05093 508 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 SYPP08247 313 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 TIE1P35590 1138 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 TNFRSF4P43489 277 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 KIR2DL1P43626 348 aaPredicted RBP12.92□□□□□ -0.34
CRTC3-213ENST00000561255 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
CRTC3-213ENST00000561255 CFAP221Q4G0U5 840 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 ADGRG2Q8IZP9 1017 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 FBXO18Q8NFZ0 1043 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 HMGB4Q8WW32 186 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 ZNF560Q96MR9 790 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 PNMA5Q96PV4 448 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 PKMYT1Q99640 499 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 ODF2LQ9ULJ1 636 aa12.92□□□□□ -0.34
CRTC3-213ENST00000561255 NPHP3-ACAD11A0A0J9YXS1 232 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 TCRBV21S2A2A0A5A6 115 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 EIF4E1BA6NMX2 242 aaKnown RBP12.91□□□□□ -0.34
CRTC3-213ENST00000561255 LEFTY2O00292 366 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 ADAM23O75077 832 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 GJB3O75712 270 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 APODP05090 189 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 PNPLA4P41247 253 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 SLC6A11P48066 632 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 ACOT2P49753 483 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 TOB1P50616 345 aaPredicted RBP12.91□□□□□ -0.34
CRTC3-213ENST00000561255 ZXDBP98169 803 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 RPL6Q02878 288 aaKnown RBP12.91□□□□□ -0.34
CRTC3-213ENST00000561255 MESP2Q0VG99 397 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 ST3GAL1Q11201 340 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 GNL2Q13823 731 aaKnown RBP12.91□□□□□ -0.34
CRTC3-213ENST00000561255 ARSHQ5FYA8 562 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 INTS6LQ5JSJ4 861 aaKnown RBP12.91□□□□□ -0.34
CRTC3-213ENST00000561255 SFTPA1Q8IWL2 248 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 TMEM86AQ8N2M4 240 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 PGBD3Q8N328 593 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 PDCL2Q8N4E4 241 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 FUBP3Q96I24 572 aaKnown RBP eCLIP12.91□□□□□ -0.34
CRTC3-213ENST00000561255 PCDHB9Q9Y5E1 797 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
CRTC3-213ENST00000561255 A0A1W2PQD8 194 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 K7ENM7 598 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 SLC9A3R1O14745 358 aaPredicted RBP12.9□□□□□ -0.34
CRTC3-213ENST00000561255 SH3BP5O60239 455 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 ABCD1P33897 745 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 GRIA2P42262 883 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 MAGEA11P43364 429 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 SLC7A9P82251 487 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 MYL7Q01449 175 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 ZNF33AQ06730 810 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 DHCR24Q15392 516 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 ZRSR1Q15695 479 aaKnown RBP12.9□□□□□ -0.34
CRTC3-213ENST00000561255 EMC10Q5UCC4 262 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 FILIP1Q7Z7B0 1213 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
CRTC3-213ENST00000561255 CEP295NLQ96MC4 621 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 CAMK1GQ96NX5 476 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 DDX43Q9NXZ2 648 aaKnown RBP12.9□□□□□ -0.34
CRTC3-213ENST00000561255 CACNA2D2Q9NY47 1150 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 RAXQ9Y2V3 346 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 STYXL1Q9Y6J8 313 aa12.9□□□□□ -0.34
CRTC3-213ENST00000561255 MYO18AQ92614 2054 aaKnown RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 URB1O60287 2271 aaKnown RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 HUS1O60921 280 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 ZIC2O95409 532 aaPredicted RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 ZNF131P52739 623 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 RESTQ13127 1097 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 TRMT11Q7Z4G4 463 aaKnown RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 GLRX5Q86SX6 157 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
CRTC3-213ENST00000561255 NAXDQ8IW45 347 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 SCN4BQ8IWT1 228 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 MYCT1Q8N699 235 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 MDM1Q8TC05 714 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 LRIG1Q96JA1 1093 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 SPATA17Q96L03 361 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 ARHGEF4Q9NR80 690 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 TRPM5Q9NZQ8 1165 aa12.89□□□□□ -0.35
CRTC3-213ENST00000561255 KIAA1522Q9P206 1035 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms