RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 IL18RAPO95256 599 aa19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 POU5F1Q01860 360 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 CALML4Q96GE6 196 aa19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 MBD1Q9UIS9 605 aaPredicted RBP19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 PCDHB9Q9Y5E1 797 aa19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 TCRBV21S2A2A0A5A6 115 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 ANKRD63C9JTQ0 380 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 LEFTY2O00292 366 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 SLC9A3R1O14745 358 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 PFKLP17858 780 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 ITPKAP23677 461 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 PCSK1P29120 753 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 POLR2BP30876 1174 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 CFAP221Q4G0U5 840 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 TMEM119Q4V9L6 283 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 C19orf48Q6RUI8 117 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 SLC36A4Q6YBV0 504 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 FILIP1Q7Z7B0 1213 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 FRMD1Q8N878 549 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 IL17RCQ8NAC3 791 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 CACTINQ8WUQ7 758 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 POMGNT1Q8WZA1 660 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 FUBP3Q96I24 572 aaKnown RBP eCLIP19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 TRPM5Q9NZQ8 1165 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 L1RE1Q9UN81 338 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 AGAP1Q9UPQ3 857 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 R3HCC1Q9Y3T6 440 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 PLXND1Q9Y4D7 1925 aa19.1■□□□□ 0.65
TSPAN3-208ENST00000560514 FAM221BA6H8Z2 402 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 SGK1O00141 431 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 ZBTB24O43167 697 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 KAT7O95251 611 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 SYPP08247 313 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 SERPINF2P08697 491 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 HNRNPLP14866 589 aaKnown RBP eCLIP19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 LHX1P48742 406 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 ATP2C1P98194 919 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 TFAMQ00059 246 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 GTF2BQ00403 316 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 RPL6Q02878 288 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 RESTQ13127 1097 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 MAP7D1Q3KQU3 841 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 C4orf50Q6ZRC1 276 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 RASSF8Q8NHQ8 419 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 LRRC15Q8TF66 581 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 FSCN3Q9NQT6 498 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 EHD2Q9NZN4 543 aa19.09■□□□□ 0.65
TSPAN3-208ENST00000560514 ANTXRLA6NF34 631 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 EIF4E1BA6NMX2 242 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 ADH1CP00326 375 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 CYP17A1P05093 508 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 ITGB3P05106 788 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 ANXA13P27216 316 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 EIF2DP41214 584 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 ZNF131P52739 623 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 SCAPQ12770 1279 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 POSTNQ15063 836 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 DHCR24Q15392 516 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 RILPL1Q5EBL4 403 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 PEAR1Q5VY43 1037 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 MCTP1Q6DN14 999 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 PDZD3Q86UT5 571 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 MINDY1Q8N5J2 469 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 ARHGEF4Q9NR80 690 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 MAGEC2Q9UBF1 373 aaPredicted RBP19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 GPSM3Q9Y4H4 160 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 SNX9Q9Y5X1 595 aa19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 MYO18AQ92614 2054 aaKnown RBP19.08■□□□□ 0.64
TSPAN3-208ENST00000560514 TISP43B9A030 160 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 ABL1P00519 1130 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 KRT19P08727 400 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 GRIK1P39086 918 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 UBA7P41226 1012 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 GRIA2P42262 883 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 MAGEA11P43364 429 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 SLC6A11P48066 632 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 TRMT11Q7Z4G4 463 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 RAB44Q7Z6P3 723 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 ADGRF2Q8IZF7 708 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 ADGRG2Q8IZP9 1017 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 DEFB119Q8N690 84 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 KIAA1958Q8N8K9 716 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 ZSCAN31Q96LW9 406 aaPredicted RBP19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 CCDC86Q9H6F5 360 aaKnown RBP19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 MYOFQ9NZM1 2061 aa19.07■□□□□ 0.64
TSPAN3-208ENST00000560514 ARHGAP33O14559 1287 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 SLC26A4O43511 780 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 TNFRSF4P43489 277 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 FAM193AP78312 1265 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 KDSRQ06136 332 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 ZNF33AQ06730 810 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 TRIP6Q15654 476 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 GAB4Q2WGN9 574 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 PREPLQ4J6C6 727 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 EMC10Q5UCC4 262 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 ARL6IP4Q66PJ3 421 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 DENND5BQ6ZUT9 1274 aa19.06■□□□□ 0.64
TSPAN3-208ENST00000560514 NUDT18Q6ZVK8 323 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms