RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 STX10O60499 249 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 FOXD2O60548 495 aaPredicted RBP14.99□□□□□ -0.01
TPM1-223ENST00000560445 LILRB5O75023 590 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 NFATC1O95644 943 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 CST3P01034 146 aaPredicted RBP14.99□□□□□ -0.01
TPM1-223ENST00000560445 LMO2P25791 158 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 HOXA6P31267 233 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 NUCB2P80303 420 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 USP4Q13107 963 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 SDHAF4Q5VUM1 108 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 CEP135Q66GS9 1140 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 TTC39CQ8N584 583 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 OSCP1Q8WVF1 389 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 SMARCD1Q96GM5 515 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 ZFYVE19Q96K21 471 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 MRPL45Q9BRJ2 306 aaKnown RBP14.99□□□□□ -0.01
TPM1-223ENST00000560445 TTLL2Q9BWV7 592 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 SMG9Q9H0W8 520 aaKnown RBP14.99□□□□□ -0.01
TPM1-223ENST00000560445 XYLT2Q9H1B5 865 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 KCTD10Q9H3F6 313 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 CRTAC1Q9NQ79 661 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 COMMD8Q9NX08 183 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 OTOGLQ3ZCN5 2332 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 VPS13AQ96RL7 3174 aa14.99□□□□□ -0.01
TPM1-223ENST00000560445 PTPRDP23468 1912 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 SHISA7A6NL88 538 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 LRRIQ3A6PVS8 624 aaPredicted RBP14.98□□□□□ -0.01
TPM1-223ENST00000560445 F8VP50 259 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 ATP2C2O75185 946 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 NR2F2P24468 414 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 PSMC2P35998 433 aaKnown RBP14.98□□□□□ -0.01
TPM1-223ENST00000560445 PIK3CAP42336 1068 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 SOX9P48436 509 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 CDR1P51861 262 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 NDUFA8P51970 172 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 CCINQ13939 588 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 PON2Q15165 354 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 ZACNQ401N2 412 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 KRBA2Q6ZNG9 492 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 ERMP1Q7Z2K6 904 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 UNC93AQ86WB7 457 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 GPIHBP1Q8IV16 184 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 GUF1Q8N442 669 aaKnown RBP14.98□□□□□ -0.01
TPM1-223ENST00000560445 SUMF1Q8NBK3 374 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 FAM84AQ96KN4 292 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 LRRC3BQ96PB8 259 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 MED10Q9BTT4 135 aa14.98□□□□□ -0.01
TPM1-223ENST00000560445 DMAP1Q9NPF5 467 aaPredicted RBP14.98□□□□□ -0.01
TPM1-223ENST00000560445 SPTBN4Q9H254 2564 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 COL4A3Q01955 1670 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 ZNF292O60281 2723 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 TRDMT1O14717 391 aaKnown RBP14.97□□□□□ -0.01
TPM1-223ENST00000560445 TADA3O75528 432 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 YWHAQP27348 245 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 ID4P47928 161 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 VAMP7P51809 220 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 LMNB2Q03252 620 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 TNK2Q07912 1038 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 ZNF77Q15935 545 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 PREPLQ4J6C6 727 aaPredicted RBP14.97□□□□□ -0.01
TPM1-223ENST00000560445 TMEM196Q5HYL7 178 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 LAIR1Q6GTX8 287 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 LONP2Q86WA8 852 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 NUP93Q8N1F7 819 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 SH3RF2Q8TEC5 729 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 ACDQ96AP0 544 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 FAXDC2Q96IV6 333 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 P2RY13Q9BPV8 354 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 EBF3Q9H4W6 596 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
TPM1-223ENST00000560445 GCNT4Q9P109 453 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 SLC8A2Q9UPR5 921 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
TPM1-223ENST00000560445 CFAP54Q96N23 3096 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 HELZP42694 1942 aaKnown RBP14.96□□□□□ -0.01
TPM1-223ENST00000560445 GREB1Q4ZG55 1949 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 CCDC163A0A0D9SF12 145 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 ZNF840PA6NDX5 716 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 PRR5-ARHGAP8B1AHC4 643 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 LRP3O75074 770 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 SMC2O95347 1197 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 C4BPAP04003 597 aaKnown RBP14.96□□□□□ -0.01
TPM1-223ENST00000560445 GTF2H1P32780 548 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 CASP4P49662 377 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 TUBP50607 506 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 SLC7A9P82251 487 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 ARHGAP8P85298 464 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 DPYDQ12882 1025 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 EDRF1Q3B7T1 1238 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 TXNDC11Q6PKC3 985 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 TSSK4Q6SA08 328 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 FAM186BQ8IYM0 893 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 ARL14EPQ8N8R7 260 aaPredicted RBP14.96□□□□□ -0.01
TPM1-223ENST00000560445 TTC16Q8NEE8 873 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 TTC8Q8TAM2 541 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 ZNF516Q92618 1163 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 FBXO32Q969P5 355 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 TSG101Q99816 390 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 FBXO44Q9H4M3 255 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 SMYD3Q9H7B4 428 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms