RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 PAAF1Q9BRP4 392 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 TMEM175Q9BSA9 504 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 ASNSD1Q9NWL6 643 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 MTUS1Q9ULD2 1270 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 PRG3Q9Y2Y8 225 aaPredicted RBP11.18□□□□□ -0.62
CRTC3-209ENST00000560320 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
CRTC3-209ENST00000560320 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
CRTC3-209ENST00000560320 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 TCRBV5S1A1TA0A578 114 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 I3L4J1 428 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SYN3O14994 580 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 HCRTO43612 131 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 AP1G2O75843 785 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 PFKMP08237 780 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 GPD1P21695 349 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SCNN1AP37088 669 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 PLA2G4AP47712 749 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 RNASE9P60153 205 aaKnown RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 RPL7AP62424 266 aaKnown RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SLC6A3Q01959 620 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 C2orf54Q08AI8 447 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 EFHC1Q5JVL4 640 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 LLGL2Q6P1M3 1020 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 CC2D1AQ6P1N0 951 aaPredicted RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 C4orf50Q6ZRC1 276 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 FAM183BPQ6ZVS7 135 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 TMEM110Q86TL2 294 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 DCP1BQ8IZD4 617 aaKnown RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SIX6OS1Q8N1H7 587 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 RASGEF1CQ8N431 466 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 MMGT1Q8N4V1 131 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 NIPA2Q8N8Q9 360 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 LRRN4CLQ8ND94 238 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SPATA4Q8NEY3 305 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SMARCD1Q96GM5 515 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 MS4A14Q96JA4 679 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 NRDE2Q9H7Z3 1164 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 DDX56Q9NY93 547 aaKnown RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 TTC7AQ9ULT0 858 aaPredicted RBP11.17□□□□□ -0.62
CRTC3-209ENST00000560320 NME7Q9Y5B8 376 aa11.17□□□□□ -0.62
CRTC3-209ENST00000560320 SF3B1O75533 1304 aaKnown RBP eCLIP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 KRIT1O00522 736 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 NRP1O14786 923 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 KIAA0355O15063 1070 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 SART1O43290 800 aaKnown RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 ATP2C2O75185 946 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 FBXO21O94952 628 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 UPP2O95045 317 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 GJB6O95452 261 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 FGGP02679 453 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 KRT7P08729 469 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 RHOXF2BP0C7M4 288 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 LCP1P13796 627 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 RFC1P35251 1148 aaPredicted RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 GJC1P36383 396 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 GLE1Q53GS7 698 aaKnown RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 SPOUT1Q5T280 376 aaKnown RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 C8orf74Q6P047 294 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 FAM35AQ86V20 835 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 SPATA2LQ8IUW3 424 aaPredicted RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 CCDC50Q8IVM0 306 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 KRT35Q92764 455 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 CD101Q93033 1021 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 RBM41Q96IZ5 413 aaKnown RBP11.16□□□□□ -0.62
CRTC3-209ENST00000560320 LPIN3Q9BQK8 851 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 RHOXF2Q9BQY4 288 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 CNPY3Q9BT09 278 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 B3GNT5Q9BYG0 378 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 TRIM7Q9C029 511 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 CRTAC1Q9NQ79 661 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 KRT82Q9NSB4 513 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 TJP2Q9UDY2 1190 aa11.16□□□□□ -0.62
CRTC3-209ENST00000560320 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 NLRC5Q86WI3 1866 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 H7C4K7 107 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 PIK3R2O00459 728 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 CLDN5O00501 218 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 ERLIN1O75477 346 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 PDGFRAP16234 1089 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
CRTC3-209ENST00000560320 SDC4P31431 198 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
CRTC3-209ENST00000560320 PEX5P50542 639 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 MAP3K7CLP57077 242 aa11.15□□□□□ -0.62
CRTC3-209ENST00000560320 ZNF211Q13398 564 aaPredicted RBP11.15□□□□□ -0.62
CRTC3-209ENST00000560320 NAA30Q147X3 362 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms